Gene Avi_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3387 
Symbol 
ID7387010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2804630 
End bp2805646 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content53% 
IMG OID643652254 
Producthypothetical protein 
Protein accessionYP_002550438 
Protein GI222149481 
COG category[S] Function unknown 
COG ID[COG5351] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.128743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCAGG TGGAAAATAA AACGCCGTTT GCTGTGCTCG GCTATTTCGC ACGGGATCGG 
GCTGGTCTGG AGCATTGGAC TGTCGCAGTC CGTGCGCGGT TTCATATTCT TCCGAGCCAG
TTGAACACCT TGATGGAAGA TCAAGGTGAA ATCCGAATCA AACCGGACTA TGCTGACAGT
GAGGGACTGG AGTTGCAGGC AGACGGGGAT TTCTGCCCTT TCAGGCCAAA GACTGACGTG
CTTTTGACCG GTGAAGCGCG TGCCCGTGCG GGCTACGAGG TGAATAAGGT CGAAGTAGGC
TTCGATCTGG CTGGACGTGG CAAACGCGCA ATGGTTTTTG GCAAAAGACA GCTGCGCCAG
AAGGTCGGAA AACTGGATCT GGAAGGGTAT GAGGCGTTTA AAGCATGCGC CTTGAACTGG
AAGCATAGCC TTGGTGGCCC GGACTTTCTC GATCCTGGTG GGGAAGCCAA TAAGGATAAT
CCGATTGGTA TGGGATGGAC AACGAAATGG CCAAACATTC CGAACGGGAC TGAAGTTTTC
TTGCCGTTGA TCGAGAACCC GGAAGCCTTC GTTGATGCAC GGCCCTTGCC TGCGCCTATT
GGCTTTGGTG CCATCCAACC CTCATGGCAA CCGCGGGCAT CTCATGCCGG AACCTATGAC
GATGACTGGC GTAAATATGA AGCTCCCTTG CTGCCATCAG ACTTTTCCGA GCAATTTTAC
CAAGTGGCGC CGGCTGATCA GATATTCGAT CTTAGGGGGG GAGAGTCAGG CCGCATCTTT
GGCATGCACG AAGAAGGCGA CTACGGCTTT CGTCTGCCTC AAGTCATTAT GGATTGTGGT
ACCTGGATCA GAGGTCATAA AGTCGAAACA AGACCAAAAT TGATTTCTGT GCTTTTGAAT
GGTTCCGACA AAACGCTGGA AATGGTGTGG AACACCAGCG TGCCATGTCC GACGGGCGAC
ATGTCGGTTT CGCATTGCCG CGTCCATATC AAGCAGATGG CTGGGGTGGA GCGATGA
 
Protein sequence
MWQVENKTPF AVLGYFARDR AGLEHWTVAV RARFHILPSQ LNTLMEDQGE IRIKPDYADS 
EGLELQADGD FCPFRPKTDV LLTGEARARA GYEVNKVEVG FDLAGRGKRA MVFGKRQLRQ
KVGKLDLEGY EAFKACALNW KHSLGGPDFL DPGGEANKDN PIGMGWTTKW PNIPNGTEVF
LPLIENPEAF VDARPLPAPI GFGAIQPSWQ PRASHAGTYD DDWRKYEAPL LPSDFSEQFY
QVAPADQIFD LRGGESGRIF GMHEEGDYGF RLPQVIMDCG TWIRGHKVET RPKLISVLLN
GSDKTLEMVW NTSVPCPTGD MSVSHCRVHI KQMAGVER