Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3387 |
Symbol | |
ID | 7387010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2804630 |
End bp | 2805646 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643652254 |
Product | hypothetical protein |
Protein accession | YP_002550438 |
Protein GI | 222149481 |
COG category | [S] Function unknown |
COG ID | [COG5351] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.128743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGCAGG TGGAAAATAA AACGCCGTTT GCTGTGCTCG GCTATTTCGC ACGGGATCGG GCTGGTCTGG AGCATTGGAC TGTCGCAGTC CGTGCGCGGT TTCATATTCT TCCGAGCCAG TTGAACACCT TGATGGAAGA TCAAGGTGAA ATCCGAATCA AACCGGACTA TGCTGACAGT GAGGGACTGG AGTTGCAGGC AGACGGGGAT TTCTGCCCTT TCAGGCCAAA GACTGACGTG CTTTTGACCG GTGAAGCGCG TGCCCGTGCG GGCTACGAGG TGAATAAGGT CGAAGTAGGC TTCGATCTGG CTGGACGTGG CAAACGCGCA ATGGTTTTTG GCAAAAGACA GCTGCGCCAG AAGGTCGGAA AACTGGATCT GGAAGGGTAT GAGGCGTTTA AAGCATGCGC CTTGAACTGG AAGCATAGCC TTGGTGGCCC GGACTTTCTC GATCCTGGTG GGGAAGCCAA TAAGGATAAT CCGATTGGTA TGGGATGGAC AACGAAATGG CCAAACATTC CGAACGGGAC TGAAGTTTTC TTGCCGTTGA TCGAGAACCC GGAAGCCTTC GTTGATGCAC GGCCCTTGCC TGCGCCTATT GGCTTTGGTG CCATCCAACC CTCATGGCAA CCGCGGGCAT CTCATGCCGG AACCTATGAC GATGACTGGC GTAAATATGA AGCTCCCTTG CTGCCATCAG ACTTTTCCGA GCAATTTTAC CAAGTGGCGC CGGCTGATCA GATATTCGAT CTTAGGGGGG GAGAGTCAGG CCGCATCTTT GGCATGCACG AAGAAGGCGA CTACGGCTTT CGTCTGCCTC AAGTCATTAT GGATTGTGGT ACCTGGATCA GAGGTCATAA AGTCGAAACA AGACCAAAAT TGATTTCTGT GCTTTTGAAT GGTTCCGACA AAACGCTGGA AATGGTGTGG AACACCAGCG TGCCATGTCC GACGGGCGAC ATGTCGGTTT CGCATTGCCG CGTCCATATC AAGCAGATGG CTGGGGTGGA GCGATGA
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Protein sequence | MWQVENKTPF AVLGYFARDR AGLEHWTVAV RARFHILPSQ LNTLMEDQGE IRIKPDYADS EGLELQADGD FCPFRPKTDV LLTGEARARA GYEVNKVEVG FDLAGRGKRA MVFGKRQLRQ KVGKLDLEGY EAFKACALNW KHSLGGPDFL DPGGEANKDN PIGMGWTTKW PNIPNGTEVF LPLIENPEAF VDARPLPAPI GFGAIQPSWQ PRASHAGTYD DDWRKYEAPL LPSDFSEQFY QVAPADQIFD LRGGESGRIF GMHEEGDYGF RLPQVIMDCG TWIRGHKVET RPKLISVLLN GSDKTLEMVW NTSVPCPTGD MSVSHCRVHI KQMAGVER
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