Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3371 |
Symbol | |
ID | 7386998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2791568 |
End bp | 2791969 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643652242 |
Product | hypothetical protein |
Protein accession | YP_002550426 |
Protein GI | 222149469 |
COG category | [R] General function prediction only |
COG ID | [COG5485] Predicted ester cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.032421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACC ATAAAAAGGC GATTGTCAGA AAACTCATTG AGGAGGTTCA GGTCGGCGGC AATTACGCCG TCTTCGATGC CCTGATGCAT CCTGATTTCA TCGACCACAC GCCCACCCCC GGCTTCGCAC CGGATCGCGA CAGCGTGCGG GCATTCTACC GTGCCTTCCA CGCCTCCTTC TCCGAACCGG TCTGCGAGAT CGATTTTCAG ACCGCCGAAG GCGACCTCGT CACCACCCGC AAGGTCTATT CCGTTACCCA CACTGGCGCC TTTAACGGCA TTCCGCCAAC CGGACGGCGC ATAACATTCG ACGTTATCGA TGTGCTGAAG ATCGAAGGAG AGTTCATTAC CGCGCATTGG GGCATTCTGA ACCTCATGAA GATCGTCGCG CAGATAAGCT GA
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Protein sequence | MSDHKKAIVR KLIEEVQVGG NYAVFDALMH PDFIDHTPTP GFAPDRDSVR AFYRAFHASF SEPVCEIDFQ TAEGDLVTTR KVYSVTHTGA FNGIPPTGRR ITFDVIDVLK IEGEFITAHW GILNLMKIVA QIS
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