| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3337 |
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| Symbol | tctD |
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| ID | 7387490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2760869 |
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| End bp | 2761534 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652218 |
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| Product | two component response regulator |
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| Protein accession | YP_002550402 |
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| Protein GI | 222149445 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.986169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGATTGC TGATCGTTGA AGACAATCAT GAATTGGCCG ATTGGCTGGC GAAGGCGCTG
ACGCAAGCGA ATTACACCGT CGATGCCGCC CATGATGGCG AAGAGGCCGA GGATTTTTTG
AACCTCGCCG ATTATGCCGC TGTGATTCTC GATCTGTCCC TGCCGAAGAT CGATGGAATG
ACCCTGCTGA AGCGCATCCG CCGCAGTGGC CGCAAAGTGC CGGTGATTAT CCTGACCGCC
AATGCCTCGC TGGACGGACG GGTGGCGGGG CTGGATTCCG GCGCTGACGA TTATCTCGCC
AAGCCCTTCG AAATGGCCGA ACTGGAAGCC CGGCTGCGGG CGCTGATCCG GCGCGGCCAT
GATCTGGCCA GCCCGGAAAT TGCCGTGGCT GATCTGGTGC TCAATAGCGC GACACGGCAG
TTTTCCCTGA AGGGCGAGGT CTTGTCGCTG ACGCCACGCG AACATTCGGT GCTGGAATAT
TTGATACTGA AGGCGGGCAG CACCGTGACC AAGGCGGCGC TGTCGCAAAG CGTGTTCGGC
TTTGATGCCG AGACCGATCC GAGCGCCATT GAGATTTACG TGCACCGGGT GCGCAAGAAG
CTGGAAGGCG GGGCGGTGCA GATCGCCACC CTGCGCGGCC TCGGCTATAT GCTGCGGGCC
GCGTGA
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| Protein sequence | MRLLIVEDNH ELADWLAKAL TQANYTVDAA HDGEEAEDFL NLADYAAVIL DLSLPKIDGM
TLLKRIRRSG RKVPVIILTA NASLDGRVAG LDSGADDYLA KPFEMAELEA RLRALIRRGH
DLASPEIAVA DLVLNSATRQ FSLKGEVLSL TPREHSVLEY LILKAGSTVT KAALSQSVFG
FDAETDPSAI EIYVHRVRKK LEGGAVQIAT LRGLGYMLRA A
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