| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3327 |
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| Symbol | |
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| ID | 7387482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2753943 |
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| End bp | 2754854 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643652210 |
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| Product | ABC transporter substrate binding protein |
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| Protein accession | YP_002550394 |
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| Protein GI | 222149437 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.419883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGGCG GTTTTGAAAA GCAGATCTAT CTGCCCGCCA AACTGACCGA GAGCCTTGGC
TATTTCAAGG AAGAAGGCCT TGATGTCGAG CTGCTGAACG AAGCGGCTGG CGTCGATGCC
GAAAACCAGC TTCTGGCCGG TGCTGTGCAC GGCGTGGTCG GTTTCTACGA CCATTGCGTC
GATCTGCAAG CCAAGGGCAA GTTCGTCGAA TCCGTCGTAC AATTCAGCCA GGCACCGGGC
GAAGTCCAGC TGGTTTCAAC CAAGAACCCT GAAATCAAGA ACTTTGCCGA TTTCAAGGGC
AAGACGCTGG GTGTGACCGG GCTTGGCTCC TCCACCAATT TCCTCACCCT CTACATGGCC
TCCAAGGCCG GGTTGAAGCC CGGCGAGATT GTCACCATTC CGGTCGGAGC GGGCGGCACG
TTCATTGCCG CCATGCAGCA GGCCAGCATC CAGGGCGGCA TGACCACCGA ACCGACGATT
TCGCGCATGG TGAAGACCGG CGAAGCCTCG ATTCTGGTCG ATCTGCGCAC CGTGGACAAG
ACCCGCGAAG CACTGGGCGG CACCTATCCG GCCGCCTCGC TCTACATGGA AACCGCCTGG
GTCAAGGAAC ATAAGGAAGA CGTGCAGAAG CTTGCTAACG CCTTCGTCAA GACGCTGAAA
TTCATCAACA CCCATTCGGC TGCCGAAATC GCTGAAAAAA TGCCGAAGGA TTTCTACGTT
GGCGATAAGG AGGGCTATAT CAAGGCTCTC GAGGCTGGCA AGGGCATGTT CACCCCCGAT
GGCGTGATGC CGGAAGATGG CCCGCCGACG GTTCTGGCCG TGCTCTCGGA GTTTTCCAAG
AACGTCAAGG GCAAGAAGAT CGACCTGTCC AAGACCTATA CGACCGAATT CGTCAAGAAC
GCCAAGTTCT GA
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| Protein sequence | MVGGFEKQIY LPAKLTESLG YFKEEGLDVE LLNEAAGVDA ENQLLAGAVH GVVGFYDHCV
DLQAKGKFVE SVVQFSQAPG EVQLVSTKNP EIKNFADFKG KTLGVTGLGS STNFLTLYMA
SKAGLKPGEI VTIPVGAGGT FIAAMQQASI QGGMTTEPTI SRMVKTGEAS ILVDLRTVDK
TREALGGTYP AASLYMETAW VKEHKEDVQK LANAFVKTLK FINTHSAAEI AEKMPKDFYV
GDKEGYIKAL EAGKGMFTPD GVMPEDGPPT VLAVLSEFSK NVKGKKIDLS KTYTTEFVKN
AKF
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