| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3321 |
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| Symbol | xdhB |
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| ID | 7387476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2744833 |
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| End bp | 2747178 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652204 |
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| Product | xanthine dehydrogenase molybdopterin binding subunit |
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| Protein accession | YP_002550388 |
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| Protein GI | 222149431 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
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| TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.98232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGG CCCTTTTCAC CACCACTGCC ACCATCCAGG GTCCGATGCA TCAATCGCTG
CGCCATGATT CAGCCCATAA GCATGTGGCT GGAAGTGCCG AATATATCGA CGATATTCCA
GAACCCGCAG GCCTGTTGCA CGGCGCGCTC GGCATGGCGG ATCGCGCCCA TGCCGACATT
CTCTCCATCG ATCTGTCCGG TGTTCAGACC TATCCCGGCG TCGTCGCGGT GCTGACGGCC
AGCGACATTC CCGGCACCAA CGATGTCTCC TCCGGTGGAC GCCATGACGA GCCGTTGATC
GCCACCGACA GGGTGGAGTT TCACGGCCAG ACCGTTTTTG CGGTAATTGC CGAGACCCGC
GACGCGGCCC GCAAGGCAGC ACGGCTCGCC AAAATAGAAT ACCGCGACCT GCCCTTCTGG
ACCGATATCG ATTCAGCACT AGAAAATGGC GCGCCGCTCG TCACCCCAGG CATGGTGCTG
AAGCGCGGCA CGCCGGAAAG CGAGCTGGAC AAGGCCGAGC ACCGGCTGCA AGGCGCGATG
CGGATCGGCG GACAGGAGCA TTTCTATCTG GAAAGCCATA TCGCGCTGGC CATTCCCGGC
GAAGACGATG ATGTCACCGT CTGGTCATCG ACCCAGCATC CGTCGGAAAT CCAGCATATC
GTTGGCCATG TGCTGGATAT TTCATCGCAT GCGATCACGG TCAATGTGCG GCGCATGGGC
GGCGGCTTCG GTGGCAAGGA AACCCAGGGC AATCAGTTTG CGGCACTGGC GGCCTTGGCC
GCCAAGAAGC TCAACCGGGC TGTGAAGTTT CGTCCGGACC GCGACGAAGA CATGAGCGTT
ACCGGCAAAC GCCATGATTT TAAAATGGAT TTCGACGTTG CCTTCGATGG TGATGGCCGT
ATCCACGCCA TAGAAGCAAA CTTCGCCGCC CGCTGCGGCT ATTCCTCGGA TCTTTCCGGC
CCCGTCACCG ACCGGGCGCT GTTTCACGCC GATAGCAGCT ATTTCTACCC GCATGTGAAG
CTGACCTCTC AACCGCTGAA AACCCACACG GTCTCCAACA CCGCCTATCG CGGCTTCGGT
GGCCCCCAGG GCATGCTGGG GGCCGAACGG GTGATCGAGG AAATCGCCTA CGCCTTGCGC
AAAGACCCGC TTGAGGTTCG CAAGGCCAAT TTCTACGGCG AGACCGGCTC TGGCCGCGAC
CTGACGCCCT ATCACCAGCA GGTCACCGAC AATATCATCG CCCGCGTGGT CGAGGAGCTG
GAAACCTCCT GCGATTATCA GGCACGGCGC GCCGCGATCC TCGACTTCAA CAAGACCAGT
TCGGTGATCA AAAAAGGCAT TGCGCTGACC CCGGTCAAGT TCGGTATCTC CTTCACCATG
ACCGCCTTCA ACCAGGCCGG CGCGCTGGTG CATGTCTATC AGGACGGCTC CATCCATCTT
AACCATGGCG GCACCGAAAT GGGCCAGGGT CTCTATACCA AGGTGGCCCA GGTGATTGCC
GATGGCTTCC AGGTTGATAT CGACAAGGTG AAGATCACCG CCACCACGAC GGGCAAGGTG
CCGAATACCT CGGCCACCGC TGCCTCTTCC GGCTCGGACC TGAACGGCAT GGCCGCCTAT
GATGCCGTGC GCCAGATCAA GGAGCGGCTG GTGGCGTTTG CCGCGGAAAA ATGGGGCGTG
TCGCAGGCCG AAGTGGTGTT CCTGCCCAAT CGGGTCAGGG TTGGCGGTGA AGAGATTGCG
TTCCCCGATT TCATCCGTCA GGCCTATTTT GCCCGCGTCC AGCTTTCCGC AGCTGGTTTC
TACAAGACAC CGAAAATCCA CTGGAACCGC GAGACCGGGC GCGGCACGCC GTTCTATTAC
TATGCCTATG GCGCGTCCTG CACCGAGGTC TCAATCGATA CGCTGACCGG CGAATATCTT
GTTGACCGTA CCGATATTCT CCACGATGTC GGCAAATCGC TCAATCCGGC TATCGATATC
GGCCAGATCG AAGGCGGTTT CGTGCAGGGC ATGGGCTGGC TGACCACGGA GGAATTGTGG
TGGGACGGCA AGGGGCGGCT GCGCACCCAC GCGCCCTCCA CCTACAAGAT CCCGCTCGCC
TCCGACCGGC CGAAGATTTT CAACGTCAAG CTGGCGGACT GGGCGGAAAA TACCGAACTC
ACCATTGGCC GTTCCAAGGC AGTCGGCGAA CCGCCCTTCA TGCTGGCCAA TTCGGTGCTG
GAGGCAATCT CCATGGCAGC GGCCAGCGTG GCCGATTACC GGTTCTGCGC GCGCCTCGAT
ACACCCGCCA CGCCGGAGCG GGTATTGATG GCGGTGGAAC GTTTGAAGGA GGCACAGCGC
GCGTGA
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| Protein sequence | MDKALFTTTA TIQGPMHQSL RHDSAHKHVA GSAEYIDDIP EPAGLLHGAL GMADRAHADI
LSIDLSGVQT YPGVVAVLTA SDIPGTNDVS SGGRHDEPLI ATDRVEFHGQ TVFAVIAETR
DAARKAARLA KIEYRDLPFW TDIDSALENG APLVTPGMVL KRGTPESELD KAEHRLQGAM
RIGGQEHFYL ESHIALAIPG EDDDVTVWSS TQHPSEIQHI VGHVLDISSH AITVNVRRMG
GGFGGKETQG NQFAALAALA AKKLNRAVKF RPDRDEDMSV TGKRHDFKMD FDVAFDGDGR
IHAIEANFAA RCGYSSDLSG PVTDRALFHA DSSYFYPHVK LTSQPLKTHT VSNTAYRGFG
GPQGMLGAER VIEEIAYALR KDPLEVRKAN FYGETGSGRD LTPYHQQVTD NIIARVVEEL
ETSCDYQARR AAILDFNKTS SVIKKGIALT PVKFGISFTM TAFNQAGALV HVYQDGSIHL
NHGGTEMGQG LYTKVAQVIA DGFQVDIDKV KITATTTGKV PNTSATAASS GSDLNGMAAY
DAVRQIKERL VAFAAEKWGV SQAEVVFLPN RVRVGGEEIA FPDFIRQAYF ARVQLSAAGF
YKTPKIHWNR ETGRGTPFYY YAYGASCTEV SIDTLTGEYL VDRTDILHDV GKSLNPAIDI
GQIEGGFVQG MGWLTTEELW WDGKGRLRTH APSTYKIPLA SDRPKIFNVK LADWAENTEL
TIGRSKAVGE PPFMLANSVL EAISMAAASV ADYRFCARLD TPATPERVLM AVERLKEAQR
A
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