| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3320 |
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| Symbol | xdhA |
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| ID | 7387475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2743108 |
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| End bp | 2744580 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652203 |
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| Product | xanthine dehydrogenase |
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| Protein accession | YP_002550387 |
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| Protein GI | 222149430 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
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| TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.151633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACC GCATCCGCTT TCTGCTCAAC GACCAGCCCG TGACGCTTGA TAGCGCCGAC
CCGACCGGCA CGCTGCTGGA TTATCTGCGT CTGGCAAAGC GGCTGACCGG GTCAAAGGAA
GGCTGCGCGG AAGGCGATTG CGGGGCCTGC ACGGTATTGG TCGGGCGGCT GGTGAAGGGC
GCGCTGCACT ATGAGGCGGT CAATGCCTGC ATCCGCTTCA TCGGCTCGCT CAACGCCACC
CATGTGGTGA CGGTCGAGCA TCTGGCCGCC ACGGATGGCA CTTTGCATCC GGTGCAGCAG
GCCATGGTGG ATTGCCATGG CTCGCAATGC GGTTTCTGCA CCCCCGGCTT CGTCATGTCG
CTCTACGGCC TGTGGCTAAC CAGCGAAGCG CCTAGCCGGG CCGAAATCGA GCGGGCCTTG
CAAGGCAATC TCTGTCGTTG CACCGGCTAT GAACCCATTG TCAAAGCTGC CGAACAGATG
GGCCGGACAA GGCCTTCAGC GCTGTTCGAT CCTTTGGCAC GGGAACGGGA GCAGATCATC
GCCACGCTGG ACGCCATGAC CAGCACCGAT ACCATTACCC TTGAAGGAGA TGATGGCCGC
AGCCTGATCG TCCCCAACAG CGTCGAGGCG CTGGCCAATG TGCTGGCGGC TCACCCCAAG
GCGACGATTG TTGCAGGTGC AACCGATGTC GGTCTGTGGG TGACGAAGCA GATGCGGACG
TTAAGCCCCG TGGTGTTCAT CAACCATCTG GAAGCCTTGC AGGCGATCAC GGTCGATGAG
AGCGGCATCA CCCTTGGTGC TGGCGTCAGC TACAGCGCCG CCTTCGACTG TCTTCGGGCG
GAAATTCCCG CCTTTGGCCG GTTGATCGAG CGGATCGGCG GCCAGCAGGT GCGCAATATG
GGCACGATTG GCGGCAATAT CGCCAATGGT TCGCCGATTG GCGACACGCC TCCGGCGCTG
ATCGCGCTTG GCGCGACGGT GACCCTGCGC TCGGCTTCGG GAACGCGAAC CTTGCTGCTG
GAAGATTTTT TCATTGAATA CGGCCGCCAA GACCGGCAGT CGGGCGAATT TGTCGAGAGC
ATTTTTCTGC CCCGCCCCAA GGCCGGAACC GATTTTGCCA TCTACAAGAT CTCCAAGCGC
CGCGACGAGG ATATTTCAGC GCTTTGTGGG GCCTTTTATC TCGAAAAAGA CAGTAAAGGC
AGCGTCACCA CCCTGCGCAT CGCCTTTGGC GGCATGGCCG GAACGCCGAA ACGGGCGCGT
GCTGTGGAAG CGGCTATGAT GGGGAAAGTC TGGAGCCGGG AGAGCATCGA GGCTGCCCGC
GCCGCCTTTG ATGCAGATTA TCAGCCGCTC TCCGACTGGC GGGCCAGCGC CGATTACCGG
CAATTGACGG CGAAAAACCT GCTGACGCGG TTCCTTTTGG AAACATCCGG CGAGAAGCAA
GAACTGGAAC GCTTTGCGGT GGAGAGGGTT TGA
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| Protein sequence | MTNRIRFLLN DQPVTLDSAD PTGTLLDYLR LAKRLTGSKE GCAEGDCGAC TVLVGRLVKG
ALHYEAVNAC IRFIGSLNAT HVVTVEHLAA TDGTLHPVQQ AMVDCHGSQC GFCTPGFVMS
LYGLWLTSEA PSRAEIERAL QGNLCRCTGY EPIVKAAEQM GRTRPSALFD PLAREREQII
ATLDAMTSTD TITLEGDDGR SLIVPNSVEA LANVLAAHPK ATIVAGATDV GLWVTKQMRT
LSPVVFINHL EALQAITVDE SGITLGAGVS YSAAFDCLRA EIPAFGRLIE RIGGQQVRNM
GTIGGNIANG SPIGDTPPAL IALGATVTLR SASGTRTLLL EDFFIEYGRQ DRQSGEFVES
IFLPRPKAGT DFAIYKISKR RDEDISALCG AFYLEKDSKG SVTTLRIAFG GMAGTPKRAR
AVEAAMMGKV WSRESIEAAR AAFDADYQPL SDWRASADYR QLTAKNLLTR FLLETSGEKQ
ELERFAVERV
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