Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3272 |
Symbol | |
ID | 7387442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2706953 |
End bp | 2708620 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652172 |
Product | formate--tetrahydrofolate ligase |
Protein accession | YP_002550356 |
Protein GI | 222149399 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2759] Formyltetrahydrofolate synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGATA TTGAAATTGC ACGTGCAGCA TCCAAGCTTG CGATCACGCA GATTGGCGAG CGTTTGGGAA TCAGCCCCGG TGATTTGCAG CCCTATGGCC ATGACAAGGC TAAGATCAGC GCTTCATTCC TGCATTCGCT TGAAGATCGC AAGGATGGCA AGCTCATCCT GGTGACGGCA ATCAATCCGA CACCAGCAGG CGAGGGCAAG ACCACGACCA CGGTCGGCCT GGTGGACGGG CTTAACCGTA TCGGCGCCAA GGCCATGGTC TGCGTGCGTG AGCCGTCGCT TGGTCCCTGT TTCGGGGTGA AGGGTGGCGC TGCCGGTGGC GGGCGGGCGC AGGTCGTGCC GATGGAAGAC ATTAACCTGC ATTTCACCGG CGATTTCCAC GCCATCACCT CCGCGCATAA CCTGCTGGCG GCGATGATCG ATAACCATAT TTACTGGGGC AATGAACAGG ATCTCGATAC GCGCCGTATC GCCTGGCGCC GGGTGGTGGA CATGAATGAC CGTGCGCTGC GCGAGATGGT CGGGGCGCTG GGTGGCGTTC GCAACGGCTT TCCGCGCGAA ACCGGCTTCG ATATCACGGT TGCTTCCGAA GTGATGGCCA TCCTCTGTCT GGCCCGCGAT CTGGCTGATC TGGAAGAGCG GTTGGGCCAG ATCGTCATCG GCTACCGGCG TGACAAGACG CCCGTGCATG CCCGTGATAT CAAGGCCCAT CAAGCCATGA CGGTGCTGCT GAAAGAGGCG ATGCAGCCCA ATCTGGTGCA GACGCTGGAA AACAATCCGG CGCTGGTGCA TGGCGGCCCG TTTGCCAATA TCGCCCACGG CTGCAATTCG GTGGTGGCGA CGAGGGCAGC CCTGAAGCTT GCCGATTATG TGGTGACGGA AGCGGGCTTT GGTGCCGATC TTGGCGCTGA AAAGTTCTTC GATATCAAAT GCCGCAAGGC CGGTTTGCGC CCGGCGGCTG CCGTCATCGT CGCTACGGTG CGGGCGTTGA AGATGAATGG CGGTGTTGCC AAAACGGAGC TTGGCCACGA GGATGTGGCC GCCCTGGTCC GGGGTGCTGT CAACCTTGGG CGGCATGTGG AAAATGTTCG GGGCTTTGGT GTGCCTGTCA TTGTCGCTAT CAACCATTTC CTGTCGGATA CGCCGGCGGA AATCGCCGCC CTTCAGGATT ATGCCGCCAG CATCGGTGTC GAAGCCGTGC TCTGCCGTCA TTGGGCCGAG GGTGGTGCGG GCATTGAGGA ACTGGCCAGG AAAGTGGCGG CCATGGCCGA CAGCGGCATT GCCGATTTCC AGCCTCTTTA CCCGGACGAC ATGCCGCTGT TTGCCAAGAT CGAAACCGTC GCCAAGCGGA TTTACCGTGC GGGGAGTGTC ACTGCGGACC GCGCTGTCAT CGACCAACTA TCCCAGTTTG AGGCTATGGG CTATGGCGAC CTGCCGGTCT GCATCGCCAA AACCCAGTAT TCCTTCTCCA CCGACCCGTC GCTGCTCGGC GCTCCCGATG GCCATGAAGT GCATGTGCGT GACGTGCGGC TATCAGCGGG TGCCGGTTTC GTGGTGGCTA TCACCGGCGA TATCATGACC ATGCCCGGCC TGCCGAGAAA GCCGGCAGCC GAAACCATCC GGCTTGATGA TGATGGGCTG GTCGAAGGCC TGTTTTAA
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Protein sequence | MSDIEIARAA SKLAITQIGE RLGISPGDLQ PYGHDKAKIS ASFLHSLEDR KDGKLILVTA INPTPAGEGK TTTTVGLVDG LNRIGAKAMV CVREPSLGPC FGVKGGAAGG GRAQVVPMED INLHFTGDFH AITSAHNLLA AMIDNHIYWG NEQDLDTRRI AWRRVVDMND RALREMVGAL GGVRNGFPRE TGFDITVASE VMAILCLARD LADLEERLGQ IVIGYRRDKT PVHARDIKAH QAMTVLLKEA MQPNLVQTLE NNPALVHGGP FANIAHGCNS VVATRAALKL ADYVVTEAGF GADLGAEKFF DIKCRKAGLR PAAAVIVATV RALKMNGGVA KTELGHEDVA ALVRGAVNLG RHVENVRGFG VPVIVAINHF LSDTPAEIAA LQDYAASIGV EAVLCRHWAE GGAGIEELAR KVAAMADSGI ADFQPLYPDD MPLFAKIETV AKRIYRAGSV TADRAVIDQL SQFEAMGYGD LPVCIAKTQY SFSTDPSLLG APDGHEVHVR DVRLSAGAGF VVAITGDIMT MPGLPRKPAA ETIRLDDDGL VEGLF
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