Gene Avi_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_3196 
Symbol 
ID7388133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2647942 
End bp2648412 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content59% 
IMG OID643652117 
Producthypothetical protein 
Protein accessionYP_002550301 
Protein GI222149344 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.130637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACAG ATAAATTATA TTTTGAAGAT TTTCCGGTTG GTACACGCCT GCCGCTTGGC 
CCCGTTACGG TGGATTTAAA CGACATTATC CAGTTTGCCA CAGAATTCGA TCCGCAGCCG
ATGCATCTCG ATGCGGAAGC CGGTGAGGCC AGCATTCTCG GCGGCTTGGC GGCCTCCGGC
TGGCACACCT GCGGGCTTTT GATGCGGATG ATGATCGACA GCTATATCCT GCGCTCCTAT
TCCGAGGGAG CGCCGGGCAT CGACTTCGTG CAGTGGAAAA CGCCTGTCCT GGCGGGTGAT
ACCCTGAGTG GCTTTTCCCT GGTTGAAGAG GCCCGGCCAT TGCGCTCGCG CCCGGGGATC
GGTGTCATCA CCAGCCGCCA TGAGCTGGTC AACCAAAAGG GCGAAACCGT CATCGTCGCC
CGCAATGCGG CCATGATGCG CCAGCGCCAA CCGGCAGGAG ACGTGGCATG A
 
Protein sequence
MQTDKLYFED FPVGTRLPLG PVTVDLNDII QFATEFDPQP MHLDAEAGEA SILGGLAASG 
WHTCGLLMRM MIDSYILRSY SEGAPGIDFV QWKTPVLAGD TLSGFSLVEE ARPLRSRPGI
GVITSRHELV NQKGETVIVA RNAAMMRQRQ PAGDVA