Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3196 |
Symbol | |
ID | 7388133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2647942 |
End bp | 2648412 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652117 |
Product | hypothetical protein |
Protein accession | YP_002550301 |
Protein GI | 222149344 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.130637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACAG ATAAATTATA TTTTGAAGAT TTTCCGGTTG GTACACGCCT GCCGCTTGGC CCCGTTACGG TGGATTTAAA CGACATTATC CAGTTTGCCA CAGAATTCGA TCCGCAGCCG ATGCATCTCG ATGCGGAAGC CGGTGAGGCC AGCATTCTCG GCGGCTTGGC GGCCTCCGGC TGGCACACCT GCGGGCTTTT GATGCGGATG ATGATCGACA GCTATATCCT GCGCTCCTAT TCCGAGGGAG CGCCGGGCAT CGACTTCGTG CAGTGGAAAA CGCCTGTCCT GGCGGGTGAT ACCCTGAGTG GCTTTTCCCT GGTTGAAGAG GCCCGGCCAT TGCGCTCGCG CCCGGGGATC GGTGTCATCA CCAGCCGCCA TGAGCTGGTC AACCAAAAGG GCGAAACCGT CATCGTCGCC CGCAATGCGG CCATGATGCG CCAGCGCCAA CCGGCAGGAG ACGTGGCATG A
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Protein sequence | MQTDKLYFED FPVGTRLPLG PVTVDLNDII QFATEFDPQP MHLDAEAGEA SILGGLAASG WHTCGLLMRM MIDSYILRSY SEGAPGIDFV QWKTPVLAGD TLSGFSLVEE ARPLRSRPGI GVITSRHELV NQKGETVIVA RNAAMMRQRQ PAGDVA
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