| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3139 |
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| Symbol | trxB |
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| ID | 7388093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2606412 |
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| End bp | 2607428 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643652077 |
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| Product | thioredoxin-disulfide reductase |
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| Protein accession | YP_002550261 |
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| Protein GI | 222149304 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCACA CCACACGTCC CTCGCCACGG AAAGGAAAGA CCATGTCCGC CCGCCATACC
AAAGTGCTGA TTATCGGCTC TGGTCCCGCC GGTTATACCG CCGCCATCTA TGCAGCCCGC
GCCATGCTGA AACCGGTGTT GATCGCCGGC ATGGAACAGG GCGGCCAGCT GATGATCACC
ACCGATGTGG AAAACTATCC CGGCTTTGCC GATCCGATCC AGGGCCCCTG GCTGATGGGC
GAAATGCTGA AACAGGCAAC CCATGTCGGC ACGGAAATCG TCAACGACCT GGTGACCGAG
GTGGAAACCA CCCGCCGCCC CTTCACCGTG AAGACCGATT CCGGCGCAGT CTGGACCGCC
GATACGCTGA TCATCTGCAC CGGCGCCAAG GCGAAGTGGC TGGGCATCGA GAGCGAGCAG
CATTTCCAGG GTTTCGGGGT TTCGGCCTGC GCCACCTGCG ATGGGTTTTT CTATCGCAAC
AAGGACGTGA TCGTGGTCGG CGGCGGCAAT TCGGCGGTCG AGGAATCCCT CTACCTGTCG
CATATCGCCA AGACCGTCAC CGTCGTGCAT CGCCGCGACA GTTTCCGCTC GGAGAAGATT
TTGCAGGAGC GGCTGTTTGC CAAGGATAAT GTCAAGGTCC TCTGGAACAC CGTCATCGAT
GAAGTCACCG GCATCCCGGC CAAGCCGCCA ATGCCGCCAT CGGTGACCGG CGTGCGGCTG
AAGAACCTCG ACAGCGGCAT CGTCACCGAT ACCCCCATCG ACGGCGTCTT CGTCGCCATT
GGCCATGCGC CGGCGGTGGA ACTGTTCACG GGCAAGCTGA AATTGAAGCC AAATGGCTAT
CTGTGGACCG CCCCGGATTC GACCGCGACC GACGTGCCCG GCATTTTTGC CGCCGGCGAC
GTGACGGATG ATATCTACCG CCAGGCTATT ACTGCTGCCG GCATGGGCTG TATGGCCGCC
CTTGAGGCAG AACGTTATCT TGCCGCGGAG ATTATCCCGG CTCAGGCCGC GGAGTGA
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| Protein sequence | MPHTTRPSPR KGKTMSARHT KVLIIGSGPA GYTAAIYAAR AMLKPVLIAG MEQGGQLMIT
TDVENYPGFA DPIQGPWLMG EMLKQATHVG TEIVNDLVTE VETTRRPFTV KTDSGAVWTA
DTLIICTGAK AKWLGIESEQ HFQGFGVSAC ATCDGFFYRN KDVIVVGGGN SAVEESLYLS
HIAKTVTVVH RRDSFRSEKI LQERLFAKDN VKVLWNTVID EVTGIPAKPP MPPSVTGVRL
KNLDSGIVTD TPIDGVFVAI GHAPAVELFT GKLKLKPNGY LWTAPDSTAT DVPGIFAAGD
VTDDIYRQAI TAAGMGCMAA LEAERYLAAE IIPAQAAE
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