| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3099 |
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| Symbol | oriC |
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| ID | 7388646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2572825 |
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| End bp | 2573730 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643652050 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002550234 |
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| Protein GI | 222149277 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03298] transcriptional regulator, ArgP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.109242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATTCG ATGGTGAGCA GTTATCGGCG CTGGTGGCTG TGCTCCGCAG CGGCAGCTTT
GAAAAGGCGG CCCGGCAATT GGGGGTAACG CAATCGGCGA TCTCGCAGCG CATCAAGCTG
CTGGAGGAGC GATCCGGCAC GGCGCTGATC ATTCGTGGCC AACCTTGCTT GCCGACCTCG
GCGGGCGCGA GGCTTTGCCG CCATGCCGAG GAAGTGGCCT TGCTGGAGCG CGAGGTGATC
GGAGATCTCG GCCTTGCGCA GGCGGCGCAG GTGACGGTGC GGCTGGCAAT CAATGCCGAT
AGTCTCGCGA CATGGTTCGT GCCAGCCATG GCTGCGGTGG AGGGCCTGTT GTTCGATCTG
GTGCTTGACG ATCAGGACCA CAGTGCCGAT TGGCTGCGGC GCGGTGAGGT GCGGGCGGCG
GTGACCTCGC TTGCCGCGCC CGTTCAGGGC TGCGATTGCC GACCGCTTGG ATTGCTGACC
TACCGCGCCA CGGCCAGCCC GGATTTTGTA GCGAGATGGT TTCCCCAGGG CGTCACCGCT
GAGGCTCTGG CTGTCGCCCC TTGCCTTACT TTCAACGCTA AGGATGGATT GCAAACCGCC
TGGATAGAGC AGGTGGCCGG ATGTCGATTG TCACCCCCTT GCCATTGGCT GCCCTCCAGC
CAGGCTTTTA TCGATGCCTC GCGTCTGGGG CTGGGCTGGG GCATGAACCC GGCAGTTTCG
GTGGCACCCT TGATTGCCGA GGGCGTGCTG GTGGATCTGA GGCCGGATCA ACCGCTTGCC
GTGCCGCTTT ATTGGCATTG GAGCAGGGCG CTGGGCCGGG CGCTCGATCC GCTAACGGCA
AGCGTCCTTG CCGCAGCACG CCAATGCTTG CTGCCCATGG CGCGTAAACT TCCATCAATG
CGGTAA
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| Protein sequence | MAFDGEQLSA LVAVLRSGSF EKAARQLGVT QSAISQRIKL LEERSGTALI IRGQPCLPTS
AGARLCRHAE EVALLEREVI GDLGLAQAAQ VTVRLAINAD SLATWFVPAM AAVEGLLFDL
VLDDQDHSAD WLRRGEVRAA VTSLAAPVQG CDCRPLGLLT YRATASPDFV ARWFPQGVTA
EALAVAPCLT FNAKDGLQTA WIEQVAGCRL SPPCHWLPSS QAFIDASRLG LGWGMNPAVS
VAPLIAEGVL VDLRPDQPLA VPLYWHWSRA LGRALDPLTA SVLAAARQCL LPMARKLPSM
R
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