| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3095 |
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| Symbol | |
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| ID | 7388643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2570142 |
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| End bp | 2570522 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643652047 |
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| Product | hypothetical protein |
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| Protein accession | YP_002550231 |
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| Protein GI | 222149274 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0432] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0121064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | CTGTACGAAT TTACCGATCA GGTCGGTGAT TTTGTCAGGC ATGCGGGCGC CCAGGAAGGA
CTATTGACTG TTTTCGTGCG CCATACGTCC TGCTCGCTGA TCATCCAGGA AAATGCCGAT
CCGGATGTGA AGCGTGATCT CAAAGTGTTT TTTCAGCGCC TGGTCCCGCC GTGTAACGAT
CCGTCCATGG CATGGATCAC CCATCGCCAG GAAGGGCCCG ATGATATGCC TGCCCATATA
AAATCGGCCC TGACGCAGGT GTCGATTGGT ATTCCGGTGG CCAATGGACG GCTTTTGCTT
GGAACCTGGC AGGGTATTTA CCTGTTCGAA CATCGCGACC AACCCCATAC GCGCCAGGTA
GTAATGCATC TAAGCTCTTG A
|
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| Protein sequence | MYEFTDQVGD FVRHAGAQEG LLTVFVRHTS CSLIIQENAD PDVKRDLKVF FQRLVPPCND
PSMAWITHRQ EGPDDMPAHI KSALTQVSIG IPVANGRLLL GTWQGIYLFE HRDQPHTRQV
VMHLSS
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