| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2977 |
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| Symbol | |
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| ID | 7386143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2486432 |
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| End bp | 2487835 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651970 |
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| Product | transcriptional regulator GntR family |
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| Protein accession | YP_002550155 |
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| Protein GI | 222149198 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0593143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAGCG ATTTGGACGC GCAGGGAACA AGCCGGATCG AGACGGTAAT GGCGGCTATT
CGGGCGCGCA TTTCCTCCCG AAGTCTGGCG ACGGGCGCGC GACTGCCCTC TGTGCGCGGC
TTTGCCAAAA CCATGCAGGT TTCGGTATCC ACAGTGGTCG AGGCTTACGA ACGGTTGGCG
GCGGAAGGGT TGATCCGCTC GCGGCCGGGC TCCGGGTTTT TCGTGGCGGC GCCCTTGGCA
CCGCTGTCCT TGACCAATCT CGGACCTCGG CTGGAGCGGG AGATCGATCC GTTCTGGGTC
TCTCGTCAAT CGTTAGAGGC CGGTGGCGAT CTGCTGAAAC CGGGATGCGG CTGGCTGCCG
CCCGATTGGT TGCCGCAGGC AGCCCTTCGG CGAGCGGTCC GTATGCTTGG CCGTACCGAT
GGTGCTGTGC TGACGGATTA TGGTTCTCCG TTGGGTCTGC CAGGGCTTCG GCAATTGCTA
TCGCGGCGGA TGGCCGATCA TGGGCTGACG GTTGCGGCGG ATGCGATCAT GCTGACGGAA
TCGGGCACCC ATGCCATCGA TCTGGTCTGC CGGTTTTTTC TGGAGCCGGG CGATTGCGTT
CTGGTCGATG ATCCCTGCTA TTTCAATTTT CATGCTCTAC TGCGGGCGCA CCGTGCCACC
ATCGTCGGCG TGCCTTATCT GGCGGATGGG CCAGACCTGG CGGCGTTCGC AGCTATTGTC
GAGGCGCATA AGCCGCGGCT CTATATTACC AATTCGGGCG TGCATAATCC CACCGGCGCA
AGCCTCTCGG CGGTGAATGC CCATCGTTTG CTGACCCTTG CCGACCGGGC CGACCTGACC
ATCGTTGAGG ATGATATTTT TGCCGATTTT GAAGATGTCG CTTCGGCGCG GCTGTCTGCC
TTCGATGGAT TGAACCGGGT GGTGCAGATC GGCAGTTTTT CCAAAACATT GTCGGCCTCG
GTGCGCTGCG GGTATATCGC CGCCCGGCGC GACTGGATCG AGGGACTGAC CGACTTGAAG
ATTGCCACGA GTTTTGGCGG CGGGCGGCTT TCCGCCGAGC TGGTGTTGGC CGTGTTGACG
GATGGCGGCT ATCGCAAACA TCTTGAAGGG CTGAAAACCC GGCTGGCCGG AGCGCGCAGC
TCCGTGGCGG CGGAGTTGTC GTCGCTTGGC TTCACGCCCT GGCTCCAGCC GAAGGCGGGA
CTTTTTCTGT GGTGTCGAAT GCCTGATGGG ATCGAATCAG GCGCTCTGGC CCGCCATTGC
CTTGACGATG GTGTCATCCT GGCACCCGGC AATGTCTTCA GCCTGTCGCA GAATGCGGGC
CGGTTCATGC GTTTCAACGT GGCGCAAACC ATGGATGCGA GGGTTCTTGG CTCATTGAAG
GCGGGTTTGC ATCAATTGCG GTGA
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| Protein sequence | MVSDLDAQGT SRIETVMAAI RARISSRSLA TGARLPSVRG FAKTMQVSVS TVVEAYERLA
AEGLIRSRPG SGFFVAAPLA PLSLTNLGPR LEREIDPFWV SRQSLEAGGD LLKPGCGWLP
PDWLPQAALR RAVRMLGRTD GAVLTDYGSP LGLPGLRQLL SRRMADHGLT VAADAIMLTE
SGTHAIDLVC RFFLEPGDCV LVDDPCYFNF HALLRAHRAT IVGVPYLADG PDLAAFAAIV
EAHKPRLYIT NSGVHNPTGA SLSAVNAHRL LTLADRADLT IVEDDIFADF EDVASARLSA
FDGLNRVVQI GSFSKTLSAS VRCGYIAARR DWIEGLTDLK IATSFGGGRL SAELVLAVLT
DGGYRKHLEG LKTRLAGARS SVAAELSSLG FTPWLQPKAG LFLWCRMPDG IESGALARHC
LDDGVILAPG NVFSLSQNAG RFMRFNVAQT MDARVLGSLK AGLHQLR
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