Gene Avi_2839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2839 
Symbol 
ID7385961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2363548 
End bp2363970 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content56% 
IMG OID643651870 
Productnucleic acid-binding protein contains PIN domain 
Protein accessionYP_002550055 
Protein GI222149098 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.454124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGAACTATC TACTGGACAC GAATGTCGTC TCGGAACTGC GCAAAGTGGG AGATGGCAAG 
GCAGACCGGA ATGTGACGGA ATGGATTGGT GCGCAGGATT CTCGCACTCT GTTTATTTCC
GCGATCACCA TCCTGGAGCT GGAGCGCGGC ATATTGAGCC TTCAGCGGCG CGATATAGCG
CAGGGTTCTC GCCTAAGAGC ATGGATGGAT GGCCGCGTTC GTCCAGAATT TGCCGAACGA
ATTCTGGTTA TCGACGATGC AGTCGCGACG CGCTGCGCCC ATCTGCATAT CCCGGATCGC
CGTAATGAGA GCGATGCACT TATCGCAGCC ACTGCCCTGG TGCATGGGCT GGCAGTTGTG
ACACGCAATA TTCAGGATTT TGAAGGGACC GGCGTCGTGC TGATCAACCC TTGGGCTGCG
TGA
 
Protein sequence
MNYLLDTNVV SELRKVGDGK ADRNVTEWIG AQDSRTLFIS AITILELERG ILSLQRRDIA 
QGSRLRAWMD GRVRPEFAER ILVIDDAVAT RCAHLHIPDR RNESDALIAA TALVHGLAVV
TRNIQDFEGT GVVLINPWAA