Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2839 |
Symbol | |
ID | 7385961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2363548 |
End bp | 2363970 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643651870 |
Product | nucleic acid-binding protein contains PIN domain |
Protein accession | YP_002550055 |
Protein GI | 222149098 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.454124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGAACTATC TACTGGACAC GAATGTCGTC TCGGAACTGC GCAAAGTGGG AGATGGCAAG GCAGACCGGA ATGTGACGGA ATGGATTGGT GCGCAGGATT CTCGCACTCT GTTTATTTCC GCGATCACCA TCCTGGAGCT GGAGCGCGGC ATATTGAGCC TTCAGCGGCG CGATATAGCG CAGGGTTCTC GCCTAAGAGC ATGGATGGAT GGCCGCGTTC GTCCAGAATT TGCCGAACGA ATTCTGGTTA TCGACGATGC AGTCGCGACG CGCTGCGCCC ATCTGCATAT CCCGGATCGC CGTAATGAGA GCGATGCACT TATCGCAGCC ACTGCCCTGG TGCATGGGCT GGCAGTTGTG ACACGCAATA TTCAGGATTT TGAAGGGACC GGCGTCGTGC TGATCAACCC TTGGGCTGCG TGA
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Protein sequence | MNYLLDTNVV SELRKVGDGK ADRNVTEWIG AQDSRTLFIS AITILELERG ILSLQRRDIA QGSRLRAWMD GRVRPEFAER ILVIDDAVAT RCAHLHIPDR RNESDALIAA TALVHGLAVV TRNIQDFEGT GVVLINPWAA
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