Gene Avi_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2820 
Symbol 
ID7385946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp2346051 
End bp2346443 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content57% 
IMG OID643651855 
Producthypothetical protein 
Protein accessionYP_002550040 
Protein GI222149083 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.161166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTCA CTCGACTGAG CCCTTGGGCT CCGACCGTCC TCAGCATCCT GCGTATTATT 
GCGGGCCTGC TGTTTCTTGA ACATGGCATG AGCAAGCTTC TGGGCTTCCC ACCGTCGGAT
ATGAACCCGG CTGTGATGTC ACTGCCCTGG ATTGCCGGCT GCATCGAACT GGTTGGCGGC
GCACTGATCA CCATCGGCCT GTTTACCCGC CCAGCCGCCT TCATCGCTTC GGGCATGTGT
GCCTTTGCCT ATTTCCTCGT GCATGCTCAG ATGGGCTTCT ACCCAATGAA CAATCACGGC
GAGCCAGCTA TCCTGTTCTG CTTCGTGTTT TTCTACATCG TCTTTGCCGG TCCCGGCCCG
CTTAGCGTCG ATGCGGCGAT GCGTAAGGAA TAG
 
Protein sequence
MIFTRLSPWA PTVLSILRII AGLLFLEHGM SKLLGFPPSD MNPAVMSLPW IAGCIELVGG 
ALITIGLFTR PAAFIASGMC AFAYFLVHAQ MGFYPMNNHG EPAILFCFVF FYIVFAGPGP
LSVDAAMRKE