Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2820 |
Symbol | |
ID | 7385946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2346051 |
End bp | 2346443 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643651855 |
Product | hypothetical protein |
Protein accession | YP_002550040 |
Protein GI | 222149083 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.161166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTCA CTCGACTGAG CCCTTGGGCT CCGACCGTCC TCAGCATCCT GCGTATTATT GCGGGCCTGC TGTTTCTTGA ACATGGCATG AGCAAGCTTC TGGGCTTCCC ACCGTCGGAT ATGAACCCGG CTGTGATGTC ACTGCCCTGG ATTGCCGGCT GCATCGAACT GGTTGGCGGC GCACTGATCA CCATCGGCCT GTTTACCCGC CCAGCCGCCT TCATCGCTTC GGGCATGTGT GCCTTTGCCT ATTTCCTCGT GCATGCTCAG ATGGGCTTCT ACCCAATGAA CAATCACGGC GAGCCAGCTA TCCTGTTCTG CTTCGTGTTT TTCTACATCG TCTTTGCCGG TCCCGGCCCG CTTAGCGTCG ATGCGGCGAT GCGTAAGGAA TAG
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Protein sequence | MIFTRLSPWA PTVLSILRII AGLLFLEHGM SKLLGFPPSD MNPAVMSLPW IAGCIELVGG ALITIGLFTR PAAFIASGMC AFAYFLVHAQ MGFYPMNNHG EPAILFCFVF FYIVFAGPGP LSVDAAMRKE
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