| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2790 |
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| Symbol | |
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| ID | 7385925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2321980 |
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| End bp | 2323200 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643651834 |
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| Product | MFS permease |
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| Protein accession | YP_002550019 |
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| Protein GI | 222149062 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.68726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTTT CCAGCCCGCT CTTACGGCAC GACGCCGAAC ACGCCCTGTC GCCAGCCCTG
ACATTTATCT TCGCCCTGGC CTGCGGGCTT ATCGCCGCCA ATCTCTATTA CGGCCAGCCG
CTGGCTGGAC CGATCAGTGC GGATTTGGGG TTCTCACCCC AGGCGACCGG CCTGATCGTC
ACCCTCACCC AGCTCGGCTA CTGTCTCGGC CTTTTGCTGC TGGTGCCGCT GGGTGACCTG
ATCGAAAACC GCAAGCTGGT GATCATCCTG ATTGGTCTTG CCGCGCTGGC CCTGCTCGGC
GGCGCACTTT CCACCACACC CGGCCTTTTC CTGCTGGCCT GCCTTGGTAT TGGCCTTGCC
TCCGCAGCCG CCCAGGTTCT GGTACCCTTT GCCGCCAGCA TGGCACCGGA TGCCTCACGC
GGGCGGGTTG TCGGCAATGT TATGAGCGGC CTGCTTTGTG GCATCATGCT GGCCCGGCCC
ATTGCCAGCT TTATCGCTGA GGCATCGTCC TGGCATGTCA TCTACGTCCT TTCGGCGCTT
GCGATGATCG GATTGATGGT GGTGCTCGGC GTGACCCTGC CCCGCCGCCA ACCCCATGCG
CAGATCGGCT ACGGCGTCCT TTTGTCCTCC ATGGCCCATA TGGCGCTGAC CAACCGCGTG
CTCCAGCGCC GGGCGCTGTA TCAGGCCGGT ATGTTTGGTG CCTTCAGCCT GTTCTGGACC
ACGACGCCGC TGCTGCTGTC AGGCCCGCAT TTTGGCCTGA GCCAGAATGG TATCGCGCTG
TTTGCACTCG CCGGGGCATC TGGCGCCATT GCCTCCCCCA TTGCCGGACG AATGGCTGAT
CGCGGCCTGA CCCGGGAGAT TTCCATCGGC GCCATGGTGC TGGGCATCGG CGCGTTCCTG
CTCGGCCGCT ATGCGATTGA AACCTCCCCA ATCACAGGCG TAATTTGCCT GACACTTGCG
GCAATCACCC TGGATTTTGG CGTACAGGCC AATCTGATCA GCGGCCAGCG TATCATCTAT
TCAATGACTG CCGCCCATCG CAGCCGACTG AATGGTCTCT ATATGGCGAC ATTCTTTCTT
GGCGGTGCGC TTGGTTCAGC TATAGGCGGC TGGGCCTACG CCACAGGCGG ATGGTCACTG
ACCGCCTGGA TCGGCCTCTG CTTTCCCGCC GCCTCGCTTG TGCTGCTACT GACGGAACGG
CGGCAAACGG CAAAAGTATA A
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| Protein sequence | MTLSSPLLRH DAEHALSPAL TFIFALACGL IAANLYYGQP LAGPISADLG FSPQATGLIV
TLTQLGYCLG LLLLVPLGDL IENRKLVIIL IGLAALALLG GALSTTPGLF LLACLGIGLA
SAAAQVLVPF AASMAPDASR GRVVGNVMSG LLCGIMLARP IASFIAEASS WHVIYVLSAL
AMIGLMVVLG VTLPRRQPHA QIGYGVLLSS MAHMALTNRV LQRRALYQAG MFGAFSLFWT
TTPLLLSGPH FGLSQNGIAL FALAGASGAI ASPIAGRMAD RGLTREISIG AMVLGIGAFL
LGRYAIETSP ITGVICLTLA AITLDFGVQA NLISGQRIIY SMTAAHRSRL NGLYMATFFL
GGALGSAIGG WAYATGGWSL TAWIGLCFPA ASLVLLLTER RQTAKV
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