| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2787 |
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| Symbol | |
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| ID | 7385923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2320419 |
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| End bp | 2321132 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651832 |
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| Product | aspartate racemase |
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| Protein accession | YP_002550017 |
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| Protein GI | 222149060 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1794] Aspartate racemase |
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| TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.328239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGATGA TCGGCTTGAT TGGCGGAATG AGCTTTGAAA GCTCGGCGGT TTACTATCGG
CTCATCAATG AGGCAGTTCG CCATCAGTTG GGCGGTTTGG CATCGGCTGA AATCGTCATG
CGCTCGGTCG ATTTTTCGCA GATTGTTGGC TACCAAAAGG CAGGCCGTTG GGATCTGGCG
GAAAAGGTGC TGGGCGATGC CGCTGCCGCC CTGGAACGCG CCGGTGCCGA ATGCGTGTTG
ATCTGCACCA ACACCATGCA TCTGATTGCC GATGCCGTGG CGGCCCGTGT TTCCGTGCCG
CTTATCCATA TTGTCGATGC AACGGCCCAG GCCATCAAAG ACGCTGGCTT CAAACGGCCC
CTGCTGCTGG CCACCCGCTA CACGATGGAG CATGGCTTTT ATACCGATCG CATGCGCGCC
CTCGGCCTGC TGCCCATGGT GCCAGGCGCA GAGGATCGCG GCATCGTCCA TGATGTGATT
TTCGATGAAC TCTGCGCTGG CCGGGTCGAA GCACAGTCGC GGGCTGCCTA TCTGGCGATC
ATTGAAAAGG CCAAGGCAGA CGGTGCCGAT TGCGTCATTC TCGGCTGCAC CGAGATTTGC
CTTCTGCTCG ATCCCAAAAA TCTTTGCCTG CCGGGCTTTG ATTCCACTGC CATTCACTGT
GCGTCTGCGG TGGAATTTTC GCTCACTCCG CAACAGGTTA AGAAGATCGC CTGA
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| Protein sequence | MRMIGLIGGM SFESSAVYYR LINEAVRHQL GGLASAEIVM RSVDFSQIVG YQKAGRWDLA
EKVLGDAAAA LERAGAECVL ICTNTMHLIA DAVAARVSVP LIHIVDATAQ AIKDAGFKRP
LLLATRYTME HGFYTDRMRA LGLLPMVPGA EDRGIVHDVI FDELCAGRVE AQSRAAYLAI
IEKAKADGAD CVILGCTEIC LLLDPKNLCL PGFDSTAIHC ASAVEFSLTP QQVKKIA
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