| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2771 |
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| Symbol | intD |
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| ID | 7388419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2308878 |
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| End bp | 2309813 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651821 |
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| Product | phage-related integrase |
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| Protein accession | YP_002550007 |
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| Protein GI | 222149050 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.256547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTCGA AACCAGGGAC AAAGGCATTC ACTCAGGAAT TCCTTCGTCT GACCCGTGAC
CGTCAAAAAC CTGCCATAGC CAGCACCATC GGTTCGCTGA TTGATGAATA TCGTCAAACG
GCCCGCTATA AGGCGCTCTC GCCATCAACT AGGCGCGATT ATGAGAGGAT CTTCGGAGCC
ATTCGCTTGG AGTACGGAGA TTGTCCGCTT GCAGCCGTCG AAGCTCGTGG CAGCCGCCGT
GGCTTTCTGT CGTGGCGCGA CAAGATGAAA GATTCGCCTC GCTCTGCCGA TATGCACATC
GCCCTGCTCA GCCGCCTGTT CGTCTGGGCT AAGGACAGCG AATACATCAT GCGTAACCCG
CTCGAGCGCG TGGAGCGACT GCACGAAGGT AGCCGGAAAG ACATCATCTG GAGTTCCAAC
CAGATCGACA AACTTCTCGC CGAGGCATCG CCGCACATCC GCGACGTGGC CAAGGTGGCG
CTTTGGACGA TGCAGAGGCA GGCAGACATC CTCACGATGC CGACGCTCGC CTTCGACGGC
GAGCGGCTAT CAATCAAGCA GGGGAAGACT GGCGCGCGCG TCCGGGTGAT AGCAGCGCCG
GATCTGATGC CTATGCTGCG TAAAGCTAAA GAGGCACAGC GCCAAAGAGT TTTGGTCAAC
TCGTTCGGGC AAAACTGGAC TTCAAGCGGC TTTCGGGCGT CCTGGCGCAA GGAAATGGCG
AGGCTCGGTA TAAAGGGCGT CACGTTCCAC GATCTGCGCG GAACCGCGAT CACCTTCGCC
TATGCGCACC TCGACCGGCC GCATGACGAA AAGATAAAAC TCATTTCCGA AATATCCGGC
CACTCGCGCG AAGACGCCGA ATCGATCATC CGCAAGCATT ATCTCGCCGG CCAGGAGGTT
ATCGACGCTA TTGGGCGAGG AACGTCCCGT GAATGA
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| Protein sequence | MQSKPGTKAF TQEFLRLTRD RQKPAIASTI GSLIDEYRQT ARYKALSPST RRDYERIFGA
IRLEYGDCPL AAVEARGSRR GFLSWRDKMK DSPRSADMHI ALLSRLFVWA KDSEYIMRNP
LERVERLHEG SRKDIIWSSN QIDKLLAEAS PHIRDVAKVA LWTMQRQADI LTMPTLAFDG
ERLSIKQGKT GARVRVIAAP DLMPMLRKAK EAQRQRVLVN SFGQNWTSSG FRASWRKEMA
RLGIKGVTFH DLRGTAITFA YAHLDRPHDE KIKLISEISG HSREDAESII RKHYLAGQEV
IDAIGRGTSR E
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