| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2676 |
|---|
| Symbol | dgt |
|---|
| ID | 7388345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 2216758 |
|---|
| End bp | 2217975 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643651746 |
|---|
| Product | deoxyguanosinetriphosphate triphosphohydrolase-like protein |
|---|
| Protein accession | YP_002549933 |
|---|
| Protein GI | 222148976 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0232] dGTP triphosphohydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.245708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATCG ATAGAAATGC ATTGGGATTC GGTGTTGGAG AACGGGCAAT TTTTGCTGCC
GATCCCTGGA ACTCGCGTGG GCGCCTCTAT CCGGAAGGCG GCAGCCTGAC CCGGTCCGAT
TTCCAGCGCG ACCGCGACCG CATTGTTCAT ACGACAGCTT TTCGCCGCCT CAAGCATAAG
ACGCAGGTTT TCATCGGCCC CGACAGCGAC CATTACCGCA CCCGGTTGAC CCACACGATA
GAGGTGGCGC AAATTGCCCG GGCGCTGGCC CGCGCCTTCC GCATCGACGA GGATCTGGCC
GAAGGCGTGG CTCTGGTGCA TGATTTCGGC CACACACCGT TTGGCCATAC CGGCGAGGAT
GCGCTGCACG AATTGCTGGA ACCCTATGGT GGCTTCGATC ACAATGCCCA GTCGTTGCGG
ATCGTCACCA AGCTGGAGCG CCGCTACGCC GAATTCGATG GCCTTAACCT GACCTGGGAA
ACGCTGGAAG GCCTGGTCAA GCACAATGGG CCGCTGATGA ATGCGGACGG CGAGGGGACG
CGCGGACCGG TGCCTTTGCC GATCACAGAA TATTGTCAGA TGCAGGATCT CGACATTGCC
AGCCATGCCA GCCTGGAAGC CCAGGCTGCC GCAGTCGCCG ACGATATCGC CTATAATACC
CATGACATCG ATGATGGTCT GCGCTCCGGT TATCTGACGT TTGATATGCT GGAGGATGTG
CCGTTTCTGG CTGGTTTGAT GCGCGATGTG CGCGACCGCT ATCCCAATCT AGAGGCCGAC
CGGTTTACGC ATGAGATCAT GCGCCGCCAG ATCACCCGGA TGGTTGAGGA CGTGATTGCG
GTGGCCCAGG AGCGGCTGGC GCGTATTCGC CCGATGTCGG CTGACGATAT TCGCCAGGCG
GGTGAAACCG TTATTACCTT TTCGGAAGGA ATGGCCGAGA CCGACCGGCA GATCAAGAAA
CTGCTGTTTT CGAAAATCTA CCGCCATCCC GATATTATGC GTATTCGCGC TGGCGCGGCC
CAGATCGTCA CGGATTTGTT CAAGGCCTAT ATGGCCGATC CGACCCTGAT GCGCAGCGAC
TATTGGGTGG AGCATACGGC AGGGCTGGAA ACGCCTGCCA AAGCCCGCCA TGTCGGCGAT
TTTCTGGCCG GGATGACCGA CACCTATGCG GTGCGTGTCC ACCGGCAGCT GTTTGACCAT
ACACCCGATT TGCGCTAG
|
|---|
| Protein sequence | MTIDRNALGF GVGERAIFAA DPWNSRGRLY PEGGSLTRSD FQRDRDRIVH TTAFRRLKHK
TQVFIGPDSD HYRTRLTHTI EVAQIARALA RAFRIDEDLA EGVALVHDFG HTPFGHTGED
ALHELLEPYG GFDHNAQSLR IVTKLERRYA EFDGLNLTWE TLEGLVKHNG PLMNADGEGT
RGPVPLPITE YCQMQDLDIA SHASLEAQAA AVADDIAYNT HDIDDGLRSG YLTFDMLEDV
PFLAGLMRDV RDRYPNLEAD RFTHEIMRRQ ITRMVEDVIA VAQERLARIR PMSADDIRQA
GETVITFSEG MAETDRQIKK LLFSKIYRHP DIMRIRAGAA QIVTDLFKAY MADPTLMRSD
YWVEHTAGLE TPAKARHVGD FLAGMTDTYA VRVHRQLFDH TPDLR
|
|---|
| |