| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2647 |
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| Symbol | cobN |
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| ID | 7386641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2187063 |
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| End bp | 2190845 |
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| Gene Length | 3783 bp |
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| Protein Length | 1260 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643651721 |
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| Product | cobaltochelatase CobN subunit |
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| Protein accession | YP_002549908 |
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| Protein GI | 222148951 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.844431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTTC TGCTTGCCCA GCAAGGCTCG ATCAGCGACG GGGATGACGC GATAGACCTT
GGCCAGACGC CGGGGGATAT CCTGTTTCTG TCCGCCGCCG ATACCGAGCT GTCCGCCATC
GCGGCGGCGC TGGCGCGGCA ATCCGAGACC GCGACATGGC GGCTCGCCAG CCTGATGGCG
CTGAAACATC CGATGTCGGT CGATACCTAT ATCGAGCGCA CCGCCCGCCA TGCGAAACTG
ATTGTGGTCA AGGCTTTGGG TGGGGCCAGC TATTTTCATT ATGCGCTGGA AGCGCTGCAC
GCCTGCGCCC GCCGCCATGG GATCAAAATT GCCGTCCTGC CCGGCGACGA CAAGCCGGAT
GCCGGGCTGG AGGCTTTTTC AAACCTGGAT GCCTCGGATC TATCGGCGCT TTGGGCCTAT
CTGATCGAAG GCGGCGATAG TAATGCCAGC CATTTCGTGG CTTTTGCGCA AGCGCTGCTG
ACCAATGCAC CGAAACCGCA GGAGGCTTTG CCGCTGCTGA AAGCCGGGCT GTGGTGGCCA
GGGCGAGGGG CGATCGACGT TCCGGCATGG CAGGCGCTTG CAGGTGAGGG GCCGATTGCT
GCCCTGTGCT TTTACCGCGC CCTCGTCCAG AGCGGCGAGA CCGCGCCGGT TGAGGCGATG
ATCGAGGCGT TGCAAGCGCA GGGCCTGCGG GTCTTGCCGG TGTTTGTCGC CAGTCTGAAA
GATGCTGTCT GCGTTGAGAC GCTGCGGATG ATTTTTAAGC AGGCCGCACC GGATGTGGCG
GTCAACACGA CAGGCTTTGC CGTGTCCGTT CCGGGTGCCG ATGCGCCCTC GACCGTGCTG
GACGAGCACG GCGCGGTGGT GTTGCAGGCG CTGTTTTCCT CGTCGCCACG CTCCGTCTGG
GAAGCCTCGA TGCAAGGGCT GAGCGCCCGC GATCTCGCCA TGAATGTCGC GCTGCCGGAG
GTGGACGGGC GGGTGCTGAC CCGCGCCGTG TCCTTCAAAT CCGCTGCCCG CTACGATGCG
CGGGTGGAAA CCACACTGGT CAGCCATGCG CCGGACCCGG GCCGCATGGC CTTCGTCGCC
AGCCTGGCTG CCAATTGGGC GCGGCTGAGG CACACACCTG CGCCAGAACG GCAGGTCGCC
CTGATCGTGG CCAACTATCC CAACCGGGAT GGGCGCCTTG GCAATGGTGT CGGGCTGGAT
ACCCCTGCCG CCAGCCTTGA AGTGTTGAAG GCCCTCAAAG CCGAGGGCTA CGACACCGGC
ATCCTGCCCG CCAACTCTGA TGCGCTGATG ACGACACTGA TGGCAGGTGT CACCAATGCA
GCGGTGAAGG GCAGGGTGAT CCGCGAGACC CTGCCACTTG CCGATTACCA GCGGTTTTTC
GGGAGCCTGC CTGACAAGAT CAGGCGGGAG ATTAGCGACA GATGGGGGGA GCCGCAGGCC
GATCCGTTTT TTGCCGGGGA TGGTTTCGCG CTGCCGCTGC TGCGGTTTGG CAAGGTGATG
GTCGGCATTC AGCCAGCGCG GGGCTATAAT ATCGATCCGA AGGACAGCTA TCATTCGCCG
GATCTGGTGC CGCCCCACGG CTATTTCGCC TTCTACGCAT TTCTCCGCCA GAGATTTGGC
GTTCACGCCA TCATTCATAT GGGCAAGCAC GGCAATCTGG AATGGTTGCC GGGCAAGGCA
CTGGCGCTGA GCGAGAGCTG TTATCCCGAA GCGGTGCTGG GTCCGGTGCC GCATCTCTAT
CCCTTCATCG TCAACGATCC CGGTGAGGGT ACGCAGGCCA AGCGCCGGGC GAGCGCCGTC
ATTATCGACC ATCTGACCCC GCCGCTGACT AGGGCGGAAA GTTATGGCTC GCTGAAGGAT
CTGGAAGCGC TGGTCGATGA ATATTACCAG GCGATGGGCG GTGATCCGCG CCGGGTTACC
CTGTTGAAAA CCCAGATCCT CGATCTGGTC GCCGATATCG GTCTGGATGA GGATGCAGGT
ATTGCCGGTG GTGAGGCGGA GGAGGTCAAG CTGACCAAGC TCGACGCCTA TCTCTGCGAC
CTCAAGGAAA TGCAGATCCG CGACGGCCTG CATATTTTCG GGCAGGCACC GCAAGGCCGG
TTGCTGACCG ATCTGGTCGT GGCCTTGGCG CGGGTGCCGC GTGGACAAGG GCAGAGCCAA
GGGGGCCAGG GCGGCGATGC CAGTCTGCAC CGGGCGATTG CTGCCGATGC GCTTGGCGGT
TGGGCCGATT TCGACCCTCT GGACTGTGTG TTTTCCGATA TATGGGACGG GCCGCAGCCG
GAACTTCTGA GAAACCTGAC GCAAGCCCCC TGGCGCACCA AGGGCGATAC GGTCGAGCGG
ATCGAATTGC TGGCCGCAGA CATGGTGTCG TGCAGGTTTG CCTGTCCCCA AGGCTGGCAA
AACACAAGCG CTGTTCTGGA TGAGGTTGAA GCCCGGCTGA AACCGAGCGT GATCAAATCC
GGCCCAGCGG AAATCGCCGG ACTGCTCAAA GGACTGTCTG GCCGCTTCGT CGCTCCCGGT
CCGTCCGGTG CGCCGACGCG GGGACGACCG GATGTGCTAC CGACGGGGCG TAATTTCTAC
TCCGTCGATA GCCGCGCCGT GCCGACGCCT GCCGCTTACC AACTCGGCCA GAAATCCGCC
GAACTGCTGG TTGCCCGCTA TGTGCAGGAC CATGGCGAAT GGCCGGTATC GTTTGGCATT
ACCGCCTGGG GTACCAGCAA TATGCGCACG GGCGGCGATG ATATTGCCCA GGCGCTGGCG
CTGATCGGCG TCAAGCCGCT CTGGGACAGC GCCTCGCGCC GGGTGACCGG CTATGAGATC
ATTCCCCAGG CGATTTTGGG TCGCCCGCGC GTTGACGTGA CACTTCGGAT TTCAGGGTTT
TTCCGCGATG CCTTTCCTGA GCAGATCGCC TTGTTCGACA AGGCGGTGCG GGCGGTTGGC
GCTCTGGATG AGGACGCGGC GGATAACCCG ATTGCAGCGC GCATCAAGGC TGAAACAGTC
TTGTTCCAGC AACAGGGGCT GGACGAAAAG ACCGCCAGCC GCCGGGCGGG CTACCGGGTG
TTCGGGTCGA AACCCGGCGC TTACGGCGCG GGGCTGCAAG CCTTGATCGA TGAAAAGGGC
TGGGAGCGCC GGGCCGATCT GGCCGAGGCC TATCTGGTCT GGGGCGCTTA CGCTTACGGC
GCGGGCGAAG AAGGCAGGGC CGAGCGCGGC CTGTTCGAAG AGCGCTTGCA GGGCGTGCAG
GCCGTGGTGC AAAACCAGGA CAATCGCGAG CATGATCTGC TGGATAGCGA CGATTACTAT
CAATTCGAGG GCGGCATGAC GGCAGCGGTC GAGCAGCTCG CGGGTCGCAG GCCAACCGTC
TATCACAACG ACCATTCCCG ACCGGAAAAG CCTGTGATCC GTACGCTGGA GGAAGAGATT
GGCCGGGTGG TACGCGCCCG CGTCGTCAAT CCGAAATGGA TCGAAGGCGT GATGCGTCAC
GGCTATAAGG GCGCGTTCGA AATTGCCGCC TCCGTGGATT ATCTGTTCGC CTTTGCCGCC
ACCACCGGCG CCGTGCGCCA GCCGCATTTC GAAGCCGTCT ACCGGGCTTT TATTGGCGAT
GACCGGGTGC GGGCTTTCAT GGCCGATAAA AACCCGGCTG CCTTGAAGGA CATGTCGCAG
CGGTTGTTGG AATCCATCGA CCGTGGCCTC TGGACGCCGC GCAGCAATTC GGCGAGATAT
CATCTGTCCC AACTTTCCCA AGCCGAGCTT TTACAGACGA TTGAATTGGA GAATGCCCTA
TGA
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| Protein sequence | MHLLLAQQGS ISDGDDAIDL GQTPGDILFL SAADTELSAI AAALARQSET ATWRLASLMA
LKHPMSVDTY IERTARHAKL IVVKALGGAS YFHYALEALH ACARRHGIKI AVLPGDDKPD
AGLEAFSNLD ASDLSALWAY LIEGGDSNAS HFVAFAQALL TNAPKPQEAL PLLKAGLWWP
GRGAIDVPAW QALAGEGPIA ALCFYRALVQ SGETAPVEAM IEALQAQGLR VLPVFVASLK
DAVCVETLRM IFKQAAPDVA VNTTGFAVSV PGADAPSTVL DEHGAVVLQA LFSSSPRSVW
EASMQGLSAR DLAMNVALPE VDGRVLTRAV SFKSAARYDA RVETTLVSHA PDPGRMAFVA
SLAANWARLR HTPAPERQVA LIVANYPNRD GRLGNGVGLD TPAASLEVLK ALKAEGYDTG
ILPANSDALM TTLMAGVTNA AVKGRVIRET LPLADYQRFF GSLPDKIRRE ISDRWGEPQA
DPFFAGDGFA LPLLRFGKVM VGIQPARGYN IDPKDSYHSP DLVPPHGYFA FYAFLRQRFG
VHAIIHMGKH GNLEWLPGKA LALSESCYPE AVLGPVPHLY PFIVNDPGEG TQAKRRASAV
IIDHLTPPLT RAESYGSLKD LEALVDEYYQ AMGGDPRRVT LLKTQILDLV ADIGLDEDAG
IAGGEAEEVK LTKLDAYLCD LKEMQIRDGL HIFGQAPQGR LLTDLVVALA RVPRGQGQSQ
GGQGGDASLH RAIAADALGG WADFDPLDCV FSDIWDGPQP ELLRNLTQAP WRTKGDTVER
IELLAADMVS CRFACPQGWQ NTSAVLDEVE ARLKPSVIKS GPAEIAGLLK GLSGRFVAPG
PSGAPTRGRP DVLPTGRNFY SVDSRAVPTP AAYQLGQKSA ELLVARYVQD HGEWPVSFGI
TAWGTSNMRT GGDDIAQALA LIGVKPLWDS ASRRVTGYEI IPQAILGRPR VDVTLRISGF
FRDAFPEQIA LFDKAVRAVG ALDEDAADNP IAARIKAETV LFQQQGLDEK TASRRAGYRV
FGSKPGAYGA GLQALIDEKG WERRADLAEA YLVWGAYAYG AGEEGRAERG LFEERLQGVQ
AVVQNQDNRE HDLLDSDDYY QFEGGMTAAV EQLAGRRPTV YHNDHSRPEK PVIRTLEEEI
GRVVRARVVN PKWIEGVMRH GYKGAFEIAA SVDYLFAFAA TTGAVRQPHF EAVYRAFIGD
DRVRAFMADK NPAALKDMSQ RLLESIDRGL WTPRSNSARY HLSQLSQAEL LQTIELENAL
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