Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2639 |
Symbol | cobH |
ID | 7386635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2181670 |
End bp | 2183169 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643651715 |
Product | precorrin isomerase |
Protein accession | YP_002549902 |
Protein GI | 222148945 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2082] Precorrin isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0523957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGGT TTGAGGCTGT GGTCAGCGAT GCGCTGGCGG CGGACAAGCG CCTGCTGGCC GGTTTTGATT TCGCCTTCGG TTATCCCACG GGCACAGCAG AGCGGGTGAC GGGTGAGCCG GGTTGGCAAG GCCTGTGGCG CGCCATTGCC CGTGAGATTG AAGACGGTGC TGATAATGCC AATAACCGTT TCGCGCTGGC TGCCCGTTGG AACCGGGATT ATTTTGCTCG GGAGTTGCGC TTCTGGGGCA GGCCGCAGGC GCTGGATCTG GACGGCCTGT CCGCAACCAA GCCTCCCACA CCGACCAGCG CGCCTTTTAC CATGCGGCTT GCGGAGCGCC ATGCGCGCGG GGCAAAATCC GTCTGGCAAT TGGCCTATGC CGGGTCGGTG GGAAGCCAGA GCCTGTTGGG CATTGCCCGG CTGAGCCGCT TTCTCGACGG GCATCCGAAC CGTGACAAGA TTGCGGTCTG GCCGTTTGAG ACTGGCTTTA CGGCTGGAAA TGCGGAAAAA CGAGACGGTG CCTTTCGGCG ACTCGATGGC CATCCGGGCA GTTCCAGCGG CAACCATCAT GTGGTTTTGG CGGAAATTTA TCCCTCGCTG TTTTCGCTGG GGGATCATGA GACTGAAGTG AAGGATGCCG CGCAGGTGCG CCGGGTGGCG AGAGCCTTTG CCGGGTTCGA TGCAGCCGGG ATGTTGGGTC GGCTGTTTGA ACGGCCCGGC ATGCTCTCGG ATGAGGAGAT TGACGTGACG ACGCAGGAAG AGGGCTGGGT GCTGGGCATC GGCCACGAAG ATCTGGCCGC AACAGCTGCG GAGCTTCCGT TAGGCGAGCC AGATGACGCA ACGGAAGACG TCAGGCAGAT TCCGGCACTC GACTATATCC GCCAGCCAGC CGAGATCTAT CGCCAGTCCT TCGAGACCAT CCGGCGCGAG GCCAATCTCG ACCGGTTTCC TGCTGTCATG CAGCCGCTGG TGATCCGCTT GATCCATGCC TGCGGGATGA TCGATCTGGC TGATGACATC GTGTTTTCGC AGGGCGCGTT TGAGGCAGGT GCTGCGGCAC TTGCCGCCGG TGCGCCCATT CTCTGCGATG CGGAAATGGT TCGGCACGGT ATTATCCGCA GTCTTCTGCC AGTGGAAAAC GAAGTGATCT GCCTCATCAA TGATGTCAGG GTGCGGCCAC TGGCCGCCTG GGCCGGCAAT ACCCGCTCGG CAGCGCAGGT CAATCTTTGG GCCGGTCAGT TGGAAGGCGC TGTCGTTGCC ATCGGCAATG CACCAACGGC GCTGTTTCGC CTCCTGGAAT TGCTGGATCA GGGTGCGCCG AAACCTGCAT TGATCCTCGG CCTGCCGGTT GGCTTTGTCG GTGCCGCCGA AAGCAAGGCT GAACTTGCCG CCAACAGCCG AGGCGTGCCG TTCATTGCCG TTCAAGGCCG GCGAGGCGGT TCCGCCATGG CATCGGCTGC GGTCAATGCG CTGGCGGGAG GGCTTGGCGC CAATGACTGA
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Protein sequence | MARFEAVVSD ALAADKRLLA GFDFAFGYPT GTAERVTGEP GWQGLWRAIA REIEDGADNA NNRFALAARW NRDYFARELR FWGRPQALDL DGLSATKPPT PTSAPFTMRL AERHARGAKS VWQLAYAGSV GSQSLLGIAR LSRFLDGHPN RDKIAVWPFE TGFTAGNAEK RDGAFRRLDG HPGSSSGNHH VVLAEIYPSL FSLGDHETEV KDAAQVRRVA RAFAGFDAAG MLGRLFERPG MLSDEEIDVT TQEEGWVLGI GHEDLAATAA ELPLGEPDDA TEDVRQIPAL DYIRQPAEIY RQSFETIRRE ANLDRFPAVM QPLVIRLIHA CGMIDLADDI VFSQGAFEAG AAALAAGAPI LCDAEMVRHG IIRSLLPVEN EVICLINDVR VRPLAAWAGN TRSAAQVNLW AGQLEGAVVA IGNAPTALFR LLELLDQGAP KPALILGLPV GFVGAAESKA ELAANSRGVP FIAVQGRRGG SAMASAAVNA LAGGLGAND
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