Gene Avi_2636 details

Gene Information

• Locus tag: Avi_2636
• Symbol: cobJ
• ID: 7386632
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 2177882
• End bp: 2179720
• Gene Length: 1839 bp
• Protein Length: 612 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643651712
• Product: precorrin-3B C17-methyltransferase
• Protein accession: YP_002549899
• Protein GI: 222148942
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1010] Precorrin-3B methylase; [COG2073] Cobalamin biosynthesis protein CbiG
• TIGRFAM ID: [TIGR01466] precorrin-3B C17-methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.168127
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACGC CTCAAAAGAC TAGCAATGTA AAGCCTGCCA TTGTCATTCT GATGCCAACG 
GCGCTGGCCT TGGCGCGGCG CATTGCCGAG GCCGTTGGCG GTGAGGTTCA TGCTGCCGCA 
TCCCGCGTGG ACGGGGCAGA TCAGGCCTTT GACGATGTGA AAAGCGATGT CCGGGCGTTG 
TTTTCTGCTG GCCGCCCGAT CGTTGCCGTC ATGGCATCGG GTGCCTTGAT CCGGCTGCTG 
GCCCCATTGC TCACCGACAA GCAGTCCGAA CCGCCGGTGC TCTGCGTGTC CGAGGATGGC 
GCTTCCGTCG TGCCACTGCT GGGCGGCCAT CACGGTGCCA ATGACATGGC GCGGACGGTG 
GCCGAGATTC TCGATGCCCA TGCGGCGATT ACCACGGCGG GGGACCTGCG TTTCGGTGTG 
GCACTGGATG CGCCCCCTGA GGGCTATGTG CTGGCCAATC CTGAACAGGC CAAGACCGTC 
ATGGCCGAAC TGGTGGCCGG GGCAAGCGTC CGGTTGGTTG GCAATGCAGA GTGGCTGGCG 
GCTTCGCGTC TAGCCTTTGA CGACGAGGGC AAGGTGACGC TGACCGTCAC CGATCAGCGC 
CAAACGGCGG GGCCGCTGGA GCTGGTCTAC CACCCGAAAA CCCTGGTGCT GGGCATGGGC 
TGCGAGCGCC ATACCTCAAT TGAAGAGGCG ATTGCGCTGG CGCAGCAGGC ATTGGACACA 
TCTGGTCTTG CTGCCCAAAG CCTTGCTGCC GTGGCCTCGA TTGACGTTAA AGCCGATGAG 
GCGGCAATCC ATGCGGTGGC CGCGCATTTC GGTGTGCCCG CCCGGTTCTT TTCCGCCGAA 
CGGTTGGAGC AGGAACGCCC CCGTCTGCAA AACCCGTCGG ATGTGGTGTT TGCCGAGGTC 
GGTTGCCACG GCGTGGCGGA GGGCGCGGCG CTGGCGGTGG CCGGTTCGGA CGGTGTGCTG 
GTTCTGCCCA AGATCAAATC GAAAGGCGTG ACTGCCGCTC TGGGCCGCAG CGCCCAGCCC 
ATCAAGGAAA CAAGCTTTGG CCGCGCCCGT GGGACCTTGT TCGTTGTCGG CATCGGGCCG 
GGGTCGGAAG GTTGGCGTTC GCCGGAAGTC TCGCGCATGG TGGCAGCGTC GAGCGATCTC 
GTTGGCTACT CGCTTTACCT CGATCTGCTC GGATCGCTTG CCGAGGGCAA GACCCGGCAT 
GATTTCGACC TTGGCAAGGA AGAAGCCCGC GTGGTCCATG CGATGGAACT GGCGGGCGAG 
GGCAAGACAG TGGCGCTGGT CTGTTCCGGC GATGCCGGAA TTTATGCCAT GGCGACGCTG 
GTCTTCGAGC TTTTGGACAA GGGCGGAATT TCTGCGGGTG CGCAGCGGAT CGAGGTACAG 
GTTTCGCCGG GCATTTCCGC GCTTCAGGCC GCCGCCGCCC GGATTGGCGC GCCGCTCGGC 
CATGATTTCT GCACCATTTC ACTGTCCGAC CTGTTGACGC CCTGGGAGCA TATCCAGCGC 
CGGGTGAAGG CGGCGGGCGA GGGCGATTTC GTCATCGCCT TTTACAATCC GGTATCGATG 
AAGCGGCGCA CGCAACTGGC CTATGCCCGC GACCAGCTGC TGACCTATCG CCCGGCCGAT 
ACGCCGGTCA TTCTCGCCAC CAATCTTGGC CGTCCCGGCG AGATGGTGCG GGTGGTGCCA 
CTGGCTGGCT TGAATGTCGA TGACGTCGAT ATGCTGACGG TGGTCATCGT TGGTTCGTCG 
GAAAGCCGCA CTGTCAAAAC CGGTGACGGC AAGACCTGGG TTTACACGCC GCGCGGCTAT 
TCCGGCAAGG CGGATACGGC AATGCAGAAG GACGCATGA 

 

Protein sequence

MTTPQKTSNV KPAIVILMPT ALALARRIAE AVGGEVHAAA SRVDGADQAF DDVKSDVRAL 
FSAGRPIVAV MASGALIRLL APLLTDKQSE PPVLCVSEDG ASVVPLLGGH HGANDMARTV 
AEILDAHAAI TTAGDLRFGV ALDAPPEGYV LANPEQAKTV MAELVAGASV RLVGNAEWLA 
ASRLAFDDEG KVTLTVTDQR QTAGPLELVY HPKTLVLGMG CERHTSIEEA IALAQQALDT 
SGLAAQSLAA VASIDVKADE AAIHAVAAHF GVPARFFSAE RLEQERPRLQ NPSDVVFAEV 
GCHGVAEGAA LAVAGSDGVL VLPKIKSKGV TAALGRSAQP IKETSFGRAR GTLFVVGIGP 
GSEGWRSPEV SRMVAASSDL VGYSLYLDLL GSLAEGKTRH DFDLGKEEAR VVHAMELAGE 
GKTVALVCSG DAGIYAMATL VFELLDKGGI SAGAQRIEVQ VSPGISALQA AAARIGAPLG 
HDFCTISLSD LLTPWEHIQR RVKAAGEGDF VIAFYNPVSM KRRTQLAYAR DQLLTYRPAD 
TPVILATNLG RPGEMVRVVP LAGLNVDDVD MLTVVIVGSS ESRTVKTGDG KTWVYTPRGY 
SGKADTAMQK DA