Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2476 |
Symbol | sthA |
ID | 7385845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 2037474 |
End bp | 2038898 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643651587 |
Product | soluble pyridine nucleotide transhydrogenase |
Protein accession | YP_002549776 |
Protein GI | 222148819 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTACCAGT ATGATCTCGT GGTAATCGGC AGCGGTCCCG CAGGACGCCG GGCTGCCATT CAGGCCGCCA AGCTTTCCAA GAAGGTCCTG GTCATCGAGC GCGGCGGTCA TGTCGGCGGG GTCTCTGTCC ATACCGGCAC CATCCCTTCC AAAACGCTGC GTGAAACCGC TCTCAACCTG ACCGGCTGGC GCGAGCGCGG ATTTTATGGC CGCTCCTACC GCGTCAAGCA GGAAATCAGC GCCGATGACC TTCGCCGCCG CCTACTGATC ACCCTCGACC ATGAAGTCGA TGTGCTGGAA CACCAGTTTT CCCGCAACCG GGTGCAGCAA TTGCGCGGTC ACGCGATCTT CCTTGATGCT CACACGCTTG AGGTCACCAA GGAAGACGGC GAAGTGCAGC GCGTCAGCGC CAATGCAATC CTGCTGGCAG TCGGCACCCG GCCGCACCGG CCTGCGCACA TCGCCTTCGA TGGCGTCAGC ATTCTCGACA GCGACGACAT CGTTCATATC AAGGACGTGC CCCGTTCCAT GGTGGTGATC GGCGCGGGCG TTATCGGCAT CGAATATGCG ACGATCTTCA GCGCTCTGGA TACCCAGGTG ACGGTGGTCG AGCCGCGCGA CAGCATGCTG GATTTCATTG ACAAGGAAAT CGTCGAGGAC TTTTCCTACC AGCTCCGTGA CCGCAACATG AAGCTGATCT TCGGACAATC GGCGGAAAAG GTCGAAAAAG AAGATGGCAA ATGTCGGGTG ACGCTGAAGA ATGGCCGGGT GCTGACCTCC GAAATGGTGC TGTTTGCCGC AGGCCGAGTC GGCGCCACCG ATACGCTGAA CCTTGCAGCC TGCGGGCTGG AAGCTGATAA CCGTGGCCGG TTGAAGGTCA ATCCGGAGAC GTTCCAGACC GATGTCCCCA ATATCTATGC GGCCGGTGAC GTGGTTGGTT TTCCGAGTCT GGCCTCCACA TCGATGGAAC AGGGCCGTAT TGCCGCCCGC CATGCCGTTG GCGCCCCTTC CGGCGAACCG CCACAATATT TCCCCTATGG GATTTATGCC GTGCCCGAGA TTTCCACCTG TGGACTGACC GAGGAAGAGG TCAAGCAACG CGCCATTCCC TATGAATGCG GCATTGCCCA TTTCCGCGAG ACCTCACGCG GCCATATCAT GGGCCTCGAT AGCGGCATGT TGAAAATGAT CTTCTCGCTG AAAACCCGCC GCCTGCTCGG CGTTCATATC GTTGGCGAAG GCGCAACCGA ACTGGTCCAT ATCGGCCAGG CCGTGCTGAA CCTGAAGGGA ACAGTGGAAT ATTTCGTCGA AAACACCTTC AATTACCCGA CGCTGGCAGA GGCCTATAAA ATCGCCGGAC TGGACGCCTG GAACCGGATG GGAGAACTGA AGGTCGAAAA AACCGTGAAA AATGCGGCGC AATAG
|
Protein sequence | MYQYDLVVIG SGPAGRRAAI QAAKLSKKVL VIERGGHVGG VSVHTGTIPS KTLRETALNL TGWRERGFYG RSYRVKQEIS ADDLRRRLLI TLDHEVDVLE HQFSRNRVQQ LRGHAIFLDA HTLEVTKEDG EVQRVSANAI LLAVGTRPHR PAHIAFDGVS ILDSDDIVHI KDVPRSMVVI GAGVIGIEYA TIFSALDTQV TVVEPRDSML DFIDKEIVED FSYQLRDRNM KLIFGQSAEK VEKEDGKCRV TLKNGRVLTS EMVLFAAGRV GATDTLNLAA CGLEADNRGR LKVNPETFQT DVPNIYAAGD VVGFPSLAST SMEQGRIAAR HAVGAPSGEP PQYFPYGIYA VPEISTCGLT EEEVKQRAIP YECGIAHFRE TSRGHIMGLD SGMLKMIFSL KTRRLLGVHI VGEGATELVH IGQAVLNLKG TVEYFVENTF NYPTLAEAYK IAGLDAWNRM GELKVEKTVK NAAQ
|
| |