Gene Avi_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2454 
Symbol 
ID7386078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp2017444 
End bp2018031 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content53% 
IMG OID643651571 
Producthypothetical protein 
Protein accessionYP_002549760 
Protein GI222148803 
COG category[S] Function unknown 
COG ID[COG3506] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.250643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGTTA ATCTCAAAGA GGCCAACTGG CTCAATCAAC CGGCAGTGTG GCAGGCCACA 
AAAACTGGCC TTACTCTAAC GACGGATGCG AACACTGATT TCTGGCGTAA GACCCATTAC 
GGATTTACGC GCGATAGCGG GCATTTCCTC GGTACTTCCG TTGACGATGG TTTCACGGCG 
TTTGTCCGCG TCCAGGGGGA GTTTCGGTCA CTCTATGACC AAGCTGGCCT TATGGTGCGC 
ATTGACGAAA GTCGTTGGGT CAAGACAGGT GTGGAATTCA CCGATGGAGA ACGCTTCCTG 
AGTACGGTCA TCACTGATGG GAAATCTGAC TGGTCAGTAT CCCAGCCTTT CAAAGAGCTC 
GAAGATTTCT ATATTCGGGT GACACTGAAG GAAGGCGCGA TGCGCATTCA GGCATCGTCA 
GATGGCAGTG TGTGGCCGCT ACTGCGTCTT GCTCCGTTTC CAGAGGCTTC TCGTTATCTC 
GTCGGCTTGA CTGCGTGTAC GCCTGAACGA GGTGGACTGG ATGTTCGGTT CTCAGAGTTC 
ACAATAGGCG CGGCGATAAC GACCGATCTT CATGACCTTA CAGCGTAG
 
Protein sequence
MDVNLKEANW LNQPAVWQAT KTGLTLTTDA NTDFWRKTHY GFTRDSGHFL GTSVDDGFTA 
FVRVQGEFRS LYDQAGLMVR IDESRWVKTG VEFTDGERFL STVITDGKSD WSVSQPFKEL 
EDFYIRVTLK EGAMRIQASS DGSVWPLLRL APFPEASRYL VGLTACTPER GGLDVRFSEF 
TIGAAITTDL HDLTA