| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2440 |
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| Symbol | |
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| ID | 7386068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2008877 |
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| End bp | 2010127 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651561 |
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| Product | aminotransferase |
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| Protein accession | YP_002549750 |
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| Protein GI | 222148793 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTTA ATCTGGCGAA ACTTCCATCG ACCTATGATG TTGAGGCCGT CCGAAAGGAT
TTCCCGATCC TGTCACGGCT GGTGCATGGC GATAAACCGC TGGTCTACCT GGATAACGGT
GCGTCTGCGC AAAAACCCCA GGTGGTGATC GATGCCATCA GCCATGCCTA TTCCAACGAA
TATGCCAATG TGCATCGCGG CCTGCATTTT CTGTCCAATA CCGCGACCGA TGCTTATGAG
GCAGCCCGCG AAAAGGTGCG GCGTTTTCTG AATGCCGGAT CGGTGGACGA GGTGATTTTC
ACCAAGTCTT CAACCGAAGC TATCAATACG GTGGCCTACG GCCATGGCAT GAAAGAGATC
GGCGAGGGCG ATGAAATCCT CCTGACCATC ATGGAGCATC ACTCCAATAT CGTGCCCTGG
CATTTCCTGC GGGAACGCAA GGGGGCAAAG CTGGTCTGGG TGCCGGTGGA TGATGATGGT
GCGTTCCACA TCGAGGAATT CGAAAAGCGG CTGACCGACC GTACCAAGCT TATTGCCGTC
ACCCATATGT CCAATGCGCT CGGAACCGTG GTTCCGGTCA AGGAGATTTG CCGGATCGCC
AGGGAGCGCG GCATTCCGGT GCTGGTCGAT GGCAGCCAGG CGGCGGTGCA TATGCCGGTC
GATGTGCAAG ACATCGACTG CGACTGGTAT GTGATGACCG GCCACAAGCT TTACGGCCCA
TCCGGCATCG GCGTGCTCTA TGGCAAGATG GACCGGTTGC GCGCCATGCA GCCCTTCATG
GGCGGCGGCG AAATGATTGT CGATGTGACC GAGGATATGG TAACGTACAA TGATCCGCCG
CATCGGTTTG AGGCAGGAAC GCCGCCGATT GTTCAGGCCA TTGGGCTTGG CCATGCGCTG
GATTATATCG AGGGTCTTGG CCGCGAAGCA ATTGCCGCTC ACGAGGCCGA TTTGACTGCC
TATGCCCATG AGCGGCTGAC GGCGATCAAT TCGCTGCGGA TTTTCGGCAA TGCACCGGGC
AAGGGCGCGA TCTTCTCCTT CGAGATCAAG GGCATCCACG CCCATGATGT CTCGATGCTG
ATCGACCGGC GCGGCGTGGC GGTTCGGGCT GGCACGCATT GCGCTCAGCC ATTGCTGTCG
CGTTTCGGTG TTACCTCTAC CTGCCGGGCC TCTTTTGGCC TATATAATAC CCGTGAAGAA
ATCGATGCGC TGGTGGAAGC GCTTGACTAT GCCAAGACCT TCTTCGGCTG A
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| Protein sequence | MTLNLAKLPS TYDVEAVRKD FPILSRLVHG DKPLVYLDNG ASAQKPQVVI DAISHAYSNE
YANVHRGLHF LSNTATDAYE AAREKVRRFL NAGSVDEVIF TKSSTEAINT VAYGHGMKEI
GEGDEILLTI MEHHSNIVPW HFLRERKGAK LVWVPVDDDG AFHIEEFEKR LTDRTKLIAV
THMSNALGTV VPVKEICRIA RERGIPVLVD GSQAAVHMPV DVQDIDCDWY VMTGHKLYGP
SGIGVLYGKM DRLRAMQPFM GGGEMIVDVT EDMVTYNDPP HRFEAGTPPI VQAIGLGHAL
DYIEGLGREA IAAHEADLTA YAHERLTAIN SLRIFGNAPG KGAIFSFEIK GIHAHDVSML
IDRRGVAVRA GTHCAQPLLS RFGVTSTCRA SFGLYNTREE IDALVEALDY AKTFFG
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