Gene Avi_2413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2413 
Symbol 
ID7386046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1984951 
End bp1985898 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content59% 
IMG OID643651539 
Productputative sulfite oxidase subunit YedY 
Protein accessionYP_002549728 
Protein GI222148771 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00411856 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCGT TTCGACCACC GCATATTCCA GCGTCCGAGA TTACACCGCA GAGCATCTAC 
CTGTCACGCC GCAGCCTGAT CGGCGGTGCA GCGGGAACCT TGGCGCTGGC GGCGGCTGGT
GACGTGCTGG CCGCGCCCCT TACCGCCAAG CCGTCGGATT ATAAGGTGGA TGACAAGCTG
ACGCCGAAAA AAGACGTCAC CACCTATAAT AATTTCTATG AATTTGGCAC GGACAAGTCC
GATCCCGCCG CCAATTCCGG CAAATTCAAG CCGACCCCCT GGACCGTGGA GGTTGGCGGC
CTGGTTTCCA AGCCGCAGAA GATCGCCATC GAGGACATCA TGAAGTCCTT CACCATGGAA
GAGCGGATCT ACCGCATGCG CTGCGTTGAG GCCTGGTCCA TGGTCATTCC CTGGGATGGT
TTTCCGCTGT CGGCGCTTCT CGACCGTGTC GAGCCGCTGG CCAGCGCCAA ATATGTCGCG
TTTGAAACCG TGGTGCGCCC GGAAGAAATG CCGGGCCAGA GCGGTTTCTT CCAGTCGATC
AACTGGCCCT ATGTCGATGG CCTCAGGCTG GATGAAGCGC GTCATCCGCT GACCATCCTT
GCCACCGGAC TTTACGGCGA AACGCTGCCA AACCAGAATG GCGCGCCTTT GCGGCTTGTC
GTGCCATGGA AATACGGCTT CAAGGGCATT AAATCCATCG TCAAGATTAC CCTCACAGAA
AAGCAGCCTC CCTGCACCTG GAACATTCTG GCCGCCAATG AATATGGCTT CTATGCCAAT
GTGAACCCCA AGGTCGATCA CCCCCGCTGG AGCCAGGCGA CCGAGCGGCG CATAGGTGAA
GGTGGTGGCC TGTTCGGCGG CTCACGCAAG GATACCCTGC CCTTCAACGG TTATGGGGAA
CAGGTCGCCA GCCTTTACGC TGGCATGGAC CTGACCAAGA ATTTCTGA
 
Protein sequence
MAAFRPPHIP ASEITPQSIY LSRRSLIGGA AGTLALAAAG DVLAAPLTAK PSDYKVDDKL 
TPKKDVTTYN NFYEFGTDKS DPAANSGKFK PTPWTVEVGG LVSKPQKIAI EDIMKSFTME
ERIYRMRCVE AWSMVIPWDG FPLSALLDRV EPLASAKYVA FETVVRPEEM PGQSGFFQSI
NWPYVDGLRL DEARHPLTIL ATGLYGETLP NQNGAPLRLV VPWKYGFKGI KSIVKITLTE
KQPPCTWNIL AANEYGFYAN VNPKVDHPRW SQATERRIGE GGGLFGGSRK DTLPFNGYGE
QVASLYAGMD LTKNF