Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2413 |
Symbol | |
ID | 7386046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1984951 |
End bp | 1985898 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643651539 |
Product | putative sulfite oxidase subunit YedY |
Protein accession | YP_002549728 |
Protein GI | 222148771 |
COG category | [R] General function prediction only |
COG ID | [COG2041] Sulfite oxidase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00411856 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGCGT TTCGACCACC GCATATTCCA GCGTCCGAGA TTACACCGCA GAGCATCTAC CTGTCACGCC GCAGCCTGAT CGGCGGTGCA GCGGGAACCT TGGCGCTGGC GGCGGCTGGT GACGTGCTGG CCGCGCCCCT TACCGCCAAG CCGTCGGATT ATAAGGTGGA TGACAAGCTG ACGCCGAAAA AAGACGTCAC CACCTATAAT AATTTCTATG AATTTGGCAC GGACAAGTCC GATCCCGCCG CCAATTCCGG CAAATTCAAG CCGACCCCCT GGACCGTGGA GGTTGGCGGC CTGGTTTCCA AGCCGCAGAA GATCGCCATC GAGGACATCA TGAAGTCCTT CACCATGGAA GAGCGGATCT ACCGCATGCG CTGCGTTGAG GCCTGGTCCA TGGTCATTCC CTGGGATGGT TTTCCGCTGT CGGCGCTTCT CGACCGTGTC GAGCCGCTGG CCAGCGCCAA ATATGTCGCG TTTGAAACCG TGGTGCGCCC GGAAGAAATG CCGGGCCAGA GCGGTTTCTT CCAGTCGATC AACTGGCCCT ATGTCGATGG CCTCAGGCTG GATGAAGCGC GTCATCCGCT GACCATCCTT GCCACCGGAC TTTACGGCGA AACGCTGCCA AACCAGAATG GCGCGCCTTT GCGGCTTGTC GTGCCATGGA AATACGGCTT CAAGGGCATT AAATCCATCG TCAAGATTAC CCTCACAGAA AAGCAGCCTC CCTGCACCTG GAACATTCTG GCCGCCAATG AATATGGCTT CTATGCCAAT GTGAACCCCA AGGTCGATCA CCCCCGCTGG AGCCAGGCGA CCGAGCGGCG CATAGGTGAA GGTGGTGGCC TGTTCGGCGG CTCACGCAAG GATACCCTGC CCTTCAACGG TTATGGGGAA CAGGTCGCCA GCCTTTACGC TGGCATGGAC CTGACCAAGA ATTTCTGA
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Protein sequence | MAAFRPPHIP ASEITPQSIY LSRRSLIGGA AGTLALAAAG DVLAAPLTAK PSDYKVDDKL TPKKDVTTYN NFYEFGTDKS DPAANSGKFK PTPWTVEVGG LVSKPQKIAI EDIMKSFTME ERIYRMRCVE AWSMVIPWDG FPLSALLDRV EPLASAKYVA FETVVRPEEM PGQSGFFQSI NWPYVDGLRL DEARHPLTIL ATGLYGETLP NQNGAPLRLV VPWKYGFKGI KSIVKITLTE KQPPCTWNIL AANEYGFYAN VNPKVDHPRW SQATERRIGE GGGLFGGSRK DTLPFNGYGE QVASLYAGMD LTKNF
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