| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2399 |
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| Symbol | |
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| ID | 7386034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1968207 |
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| End bp | 1969442 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651527 |
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| Product | ABC transporter substrate binding protein (sugar) |
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| Protein accession | YP_002549716 |
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| Protein GI | 222148759 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.791953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATTC GGTGCATTGC GGCTGCATTG GCAGCCACTG TGGCCTTGCC GCTCGGCATG
GCCAGCGCGA CCGATCTGGA AGTGACCCAT TGGTGGACTT CGGGGGGAGA GGCGGCTGCG
GTCAAGGAGC TGGCAAAAGC TTTTGACGCG ACCGGCAACA AATGGGTCGA TGGCGCCATT
GCCGGTTCTG GTGGCACGGC ACGACCGATC ATGATCAGCC GTATCACCGG TGGTGACCCA
ATGGGGGCGA CCCAGTTCAA CCATGGCCGT CAAGCGCAGG AGCTGGTGGA GGCCGGTTTG
ATGCGCGATT TGACGGATGT GGCCACCAAG GGTCACTGGA AAGATGTGAT CAAACCCGCC
AGCCTGCTGG ATAGCTGCAC ATTGGATGGC AAAATATACT GTGCGCCAGT CAATATCCAT
TCCTCGCAGT GGCTTTGGCT GTCGAATGCG GCCTTTAAGA AAGCTGGCGT TGAGGTTCCT
AAGAACTGGA CCGAGTTTGT GGCCGCTGGC CCCGCTTTGA AAAAGGCAGG CATTCAGCCA
TTGGCGCTTG GCGGGCAGGC ATGGCAGGCC AACCTTGTTT TTGATGACCT GTTGATTGCT
CACGGTGGCA AGGACTTGTA CCTGAAAGCC TACAAGGACA AGGACGCCAA AGTTGTGGCT
GGGCCGGAGA TGGCAAAAAT CTTCCAGGCA GCAGAAGAAG CGAGAAAGCT TTCTCTGGGC
ACCAATGTTC AGGACTGGAA TCAGGCCACC AATATGGTCA TTACCGGAAA AGCCGGTGGT
CAGCTTATGG GTGACTGGGC GCAAGGCGAA TTCCAGCTTG CCGGGCAGGT GGCGGGTAAA
GACTATTCCT GCCTGCCGGG TCTTGGCATG AATGAATATC TCACGGCAAA TGGTGATGCA
TTCTACTTCC CCAAGCTGAA GGATGCTGCA AAATCCAAGG CGCAGGATGT GCTTGCCGAG
ACGATAGTTG ATCCGAAAAC GCAAGTTGCC TTTAATTTGA AGAAGGGTTC ATTGCCTATT
CGCGGCGATG TGGATTTGGC TGCTGCCAAT GACTGCATGA AGAAAGGTCT GGCCATTTTG
GCAAAGGGCA ATGTGCTGCC GAGCACGGAC CAATTGCTCT CTGCTGATAC GCAAAAGCAA
AAAGAAGACC TGTTTTCACA GTTCTTTGCC AACCCCGCCA TGACACCCGA AGCCGCGCAG
AAACGTTACG CTGAAATTAT CTCCAGCGCA GACTGA
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| Protein sequence | MIIRCIAAAL AATVALPLGM ASATDLEVTH WWTSGGEAAA VKELAKAFDA TGNKWVDGAI
AGSGGTARPI MISRITGGDP MGATQFNHGR QAQELVEAGL MRDLTDVATK GHWKDVIKPA
SLLDSCTLDG KIYCAPVNIH SSQWLWLSNA AFKKAGVEVP KNWTEFVAAG PALKKAGIQP
LALGGQAWQA NLVFDDLLIA HGGKDLYLKA YKDKDAKVVA GPEMAKIFQA AEEARKLSLG
TNVQDWNQAT NMVITGKAGG QLMGDWAQGE FQLAGQVAGK DYSCLPGLGM NEYLTANGDA
FYFPKLKDAA KSKAQDVLAE TIVDPKTQVA FNLKKGSLPI RGDVDLAAAN DCMKKGLAIL
AKGNVLPSTD QLLSADTQKQ KEDLFSQFFA NPAMTPEAAQ KRYAEIISSA D
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