Gene Avi_2353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2353 
Symbol 
ID7386001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp1923308 
End bp1923904 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content58% 
IMG OID643651494 
Producthypothetical protein 
Protein accessionYP_002549683 
Protein GI222148726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00441325 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCCT GGGCAAGGTT GAGCGAGCGC GTCGAAAACC AGGGCAAGGA CATTGTCGAT 
CTCAGATCGA ACATGAACAC CGGGTTCCAG AGCGTGCAAT CCTCGATCAA CGCTTTGTCG 
AATGAATTGC GCAGCTCCAG CAAGACACAG TGGCCGGTGA TCTGGGCAGC GGCTGGCGTC 
TGTTTCGGGA TTATCGTTGC GCTCGGCTCG CAAGCTCTTA GCCCGATCAA GGAGGCGGTT 
TCCGAAACCA AGACGGATTT GCGCGTCACG GCGCAAAATT CCCTGTCGGT TGCGGCTTTT 
ACGGATTTCA AGGCGACCTA TGAAAACAAC AGGGTCGTTT CCCGTAATGA CCTGATCGAC 
AAATTCGGCC AGGTGAATTC GCAGCTCGAA ACCATCCGTA AGGACCAGGT GCCTCGGGCA 
GAGCTGGAAC GGGCCTGGCA ATCGGAAGAT CAGCAGCGCG CGCAGATGCA AAAGCAGATC 
GATGAACTGA AGCAGGGACA GGCCACCACC TATAGCGCCC GCGACCTGCT GCTGGATATG 
CGCGACCGGC AGGACCGCTT CGAGCGCCAG CTTTACGGCC AGCGCCCGCC GAGCTGA
 
Protein sequence
MASWARLSER VENQGKDIVD LRSNMNTGFQ SVQSSINALS NELRSSSKTQ WPVIWAAAGV 
CFGIIVALGS QALSPIKEAV SETKTDLRVT AQNSLSVAAF TDFKATYENN RVVSRNDLID 
KFGQVNSQLE TIRKDQVPRA ELERAWQSED QQRAQMQKQI DELKQGQATT YSARDLLLDM 
RDRQDRFERQ LYGQRPPS