| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2290 |
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| Symbol | intD |
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| ID | 7387160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1879238 |
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| End bp | 1880278 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651457 |
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| Product | phage-related integrase |
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| Protein accession | YP_002549646 |
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| Protein GI | 222148689 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.306481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTCG AGCTGAAGGG ACTGCACAAA ACAAGCAAAC TTCTCGCTGA CGGCAGCAAA
CGGGACTATT ACTATGCCTG GAAAGGCGGC CCGCGCCTTA AAGAGAAGTA TGGCACACCA
GCGTTTGCAG AAGAATTCCG ACAGGCGACC CGCGATAGAT CCGCTCCGGA TGCCGACACG
CTGGCCTATG TGATCTCACT GTATAAACGT ATGGAGCTGC CGAGGCTGAA ACCCTCTACC
CGCAGCACCT ATCTTCCTTA TCTAAAAAAC ATAGAAATAG AGTTCGGCGA TATGGACATC
CGCGCCGTCG AGGCAACCGG CTCGCGCGCC GTCTTTCTCG AATGGCGCGA CACGATGGCC
ACGACCCCTC GCGCCGCTGA TATCGCATGG TCCATTCTGC AACGGATTAT GGCGTTCGGC
GTGCATATGG AAAAGCTGAA ACGCAACCCC TGCACAAATG CCGGTCGGCT TGCCGAATCT
GGCACGCGCC GGGAAATCAT TTGGACCCCG CCGGATCTGT CCCGTTTCCG TGCCGTCGCG
TCCCGCCAGC TGGCCGATGC CTTGCTGCTG GCAATTTGGA CCGGTCAACG CCAGGGCGAC
CTATTGAAAC TGCAATGGTC CGCCTACGAT GGGAAACACA TCCGCCTCAA ACAAGGCAAG
ACTGGTCGGC GCGTTGCCAT TCTCGTTTCC GGTACCCTTG GCAAAATGCT GGACAGGCTG
AAGGCAGAAA ACGAAGCCCG CAAAGTCCAG TCGTTGACGA TCCTGACCAA CCAGCGCGGC
CGGACATGGA CCAGCAGCGG CTTCAAGACA TCATGGGGAA AGGCAGCAAA AAAGGCCGGC
ATAACCGGCC TGACATTCCA CGATCTACGC GGAACCTTCA TCACCATGGC CCGGCGAGCT
GGCGCCTCGA TAGAGGATAT CGCCAAAGCC TCCGGCCACA CCACGAAGGA CATTCATAGC
GTGCTCGAAA CGCACTATCT GGCCGATGAT CTGGAGCAAG GTGACGTGGT GATTTTAAAG
CTCGAAGCGA ATGAAAAATG A
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| Protein sequence | MRVELKGLHK TSKLLADGSK RDYYYAWKGG PRLKEKYGTP AFAEEFRQAT RDRSAPDADT
LAYVISLYKR MELPRLKPST RSTYLPYLKN IEIEFGDMDI RAVEATGSRA VFLEWRDTMA
TTPRAADIAW SILQRIMAFG VHMEKLKRNP CTNAGRLAES GTRREIIWTP PDLSRFRAVA
SRQLADALLL AIWTGQRQGD LLKLQWSAYD GKHIRLKQGK TGRRVAILVS GTLGKMLDRL
KAENEARKVQ SLTILTNQRG RTWTSSGFKT SWGKAAKKAG ITGLTFHDLR GTFITMARRA
GASIEDIAKA SGHTTKDIHS VLETHYLADD LEQGDVVILK LEANEK
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