Gene Avi_2211 details

Gene Information

• Locus tag: Avi_2211
• Symbol: thrS
• ID: 7387915
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1815138
• End bp: 1817138
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643651396
• Product: threonyl-tRNA synthetase
• Protein accession: YP_002549590
• Protein GI: 222148633
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.920891
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGACA CCGTTTCCCT TACATTTCCC GATGGTTCCG TGCGCAGCTT TGCGGCTGGC 
GCGACCGGTC GTGATGTCGC CGAATCGATT TCCAAATCGC TGGCCAAGAA GGCCGTGGCC 
ATTGCTCTCG ATGGCGTTGT GCGCGATCTC GCCGACCCGG TTGTCGATGG AAAAATCGAG 
ATCGTCACCC GCGCCGATCC GCGTGCGCTG GAACTGATCC GTCACGACAC CGCCCATGTT 
CTCGCCGAAG CGGTGCAGGA AATGTGGCCG GGCACGCAGG TGACCATCGG TCCGGTGATC 
GAAAACGGTT TCTACTACGA CTTTGCCAAA AACGAGCCGT TCACGCCGGA AGATCTGCCG 
AAGATCGAAA AGAAGATGAA GGAAATCATC CAGCGCAATC AGCCGTTCCG CAAGGAAGTC 
TGGTCGCGTG AAAAGGCGCG CGAAGTGTTT GCCGCCAAGG GCGAATCCTA CAAGGTCGAG 
CTGATCGATG CCATTCCTGA AGATCAGGAC ATCAAGATCT ATTATCAGGG CGACTGGTTC 
GATCCTTGCC GTGGACCGCA TATGGCCTCC ACCGGCCAGA TCGGCACGGC CTTCAAGCTG 
ATGAAGGTGG CCGGTGCTTA TTGGCGCGGC GACAGCAACA ATCCGATGCT GACGCGCATC 
TACGGGACGG CCTTTGCCGA GCAGGAACAG CTCGACAATT ACCTGCACAT CCTGGCGGAA 
GCCGAAAAGC GTGACCACCG CAAGCTGGGC CGTGAAATGG ACCTGTTCCA TTTCCAGGAA 
GAAGGCCCAG GCGTGGTGTT TTGGCATGGC AAGGGCTGGA AAATGTTCCA GTCGCTGACC 
GCCTATATGC GCCGTCGGTT GGCCAACACC TATCAGGAAG TCAACGCGCC GCAGGTGCTG 
GACAAGTCGC TCTGGGAAAC CTCCGGCCAT TGGGGCTGGT ATCAGGAAAA CATGTTCGCG 
GTGAAATCCG CCCATGCCTT TACCAATCCG AACGATCCGG AAGCTGACCA GCGCGTCTTT 
GCCTTGAAGC CCATGAACTG CCCCGGCCAC GTGCAGATAT TCAAGCATGG GTTGAAGTCT 
TACCGTGAAC TGCCTGTTCG TCTTGCGGAA TTTGGTCTTG TGCATCGCTA TGAAGCATCG 
GGCGCTTTGC ATGGCTTGAT GCGTGTGCGC GGTTTCACGC AGGATGATGC GCATGTGTTC 
TGCACGGAAG AGCAAATGGC GGCTGAATGC CTGCGGATCA ACGATCTGAT CCTGTCGGTT 
TATGAGGATT TCGGCTTCAA GGAAGTCGTA GTCAAGCTCT CGACCCGTCC GGAAAAGCGC 
GTCGGCTCCG ACGAACTTTG GGATCGCGCC GAAAGCGTGA TGACCGAGGT GTTGAAGGCC 
ATCGAAGAGC AGTCCGGTGG GCGCATCAAG ACCGGTATTC TGCCGGGCGA GGGTGCATTC 
TACGGTCCGA AATTCGAATA TACGCTGAAG GATGCGATTG GTCGTGAATG GCAATGCGGC 
ACGACGCAGG TGGATTTCAA CCTGCCGGAA CGTTTCGGTG CCTTCTATAT CGACCAGCAT 
TCGGAAAAGA CCCAACCGGT GATGATTCAC CGCGCCATTT GCGGCTCGAT GGAGCGGTTC 
CTTGGCATTC TGATCGAGAA TTTTGCTGGT CACATGCCGC TGTGGTTTGC GCCCTTGCAG 
GTGGTGGTGG CGACCATTAC CTCCGAGGCT GACGACTATG GCCGCGACGT AGCCGAACAG 
CTGCGCGACG CGGGTCTCGA AGTGGAAACC GATTTCCGCA ACGAGAAGAT CAACTACAAG 
GTCCGTGAGC ATTCGGTCGG CAAGGTGCCT GTCATCATGG TTTGCGGTAA GCGCGAGGCG 
GAAGAACGCA CGGTCAATAT CCGCCGTCTC GGCAGCCAGG ATCAGGTGTC GATGACGCTG 
GATGAGGCGA TTGCCAGCCT AGTCGATGAA GCCACGCCAC CGGATGTAAA GCGCAAGCGG 
GCGGCCAGGA AGCCCGCTTA A 

 

Protein sequence

MSDTVSLTFP DGSVRSFAAG ATGRDVAESI SKSLAKKAVA IALDGVVRDL ADPVVDGKIE 
IVTRADPRAL ELIRHDTAHV LAEAVQEMWP GTQVTIGPVI ENGFYYDFAK NEPFTPEDLP 
KIEKKMKEII QRNQPFRKEV WSREKAREVF AAKGESYKVE LIDAIPEDQD IKIYYQGDWF 
DPCRGPHMAS TGQIGTAFKL MKVAGAYWRG DSNNPMLTRI YGTAFAEQEQ LDNYLHILAE 
AEKRDHRKLG REMDLFHFQE EGPGVVFWHG KGWKMFQSLT AYMRRRLANT YQEVNAPQVL 
DKSLWETSGH WGWYQENMFA VKSAHAFTNP NDPEADQRVF ALKPMNCPGH VQIFKHGLKS 
YRELPVRLAE FGLVHRYEAS GALHGLMRVR GFTQDDAHVF CTEEQMAAEC LRINDLILSV 
YEDFGFKEVV VKLSTRPEKR VGSDELWDRA ESVMTEVLKA IEEQSGGRIK TGILPGEGAF 
YGPKFEYTLK DAIGREWQCG TTQVDFNLPE RFGAFYIDQH SEKTQPVMIH RAICGSMERF 
LGILIENFAG HMPLWFAPLQ VVVATITSEA DDYGRDVAEQ LRDAGLEVET DFRNEKINYK 
VREHSVGKVP VIMVCGKREA EERTVNIRRL GSQDQVSMTL DEAIASLVDE ATPPDVKRKR 
AARKPA