| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2168 |
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| Symbol | |
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| ID | 7387883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1782133 |
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| End bp | 1783050 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651364 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002549558 |
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| Protein GI | 222148601 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00258855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCCTCG AAGCTATTCT TCTGACGGTT ATCACTGCCT CAACACCGCT GGTTATCGCT
GCCCTTGGCG AGCTTGTCAC TGAGCGCGCC GGTGTGCTCA ATCTCGGCGT CGAAGGCATG
ATGGTCATGG GCGCGGTTGC CGCTTTTGCG ACTGCCTATT CCACCGGATC ACCGCTGCTG
GGCGTGGTGG CGGGCATTGT CGCCGGGGCA GGATTTTCGC TGCTGTTTGG ATTTCTGACG
CTGACGCTTG TTACCAACCA GGTGGCTACC GGCTTGGCGC TGACCATTCT GGGGCTTGGC
GTCTCCGGCC AGTTGGGCGA GAGTTTTGTC GGCAAGCCCG GCGTCAAGCT CCAGGCCATT
GAGTTTCCGG TACTGTCGGA TATTCCCGTC CTCGGCCCTC TGCTGTTTCG GCAGGATCTG
ATCTTTTATC TGGCGATTGT CCTTGTCATT GGCGTCCACT GGTTCCTGTT TAAAAGCCGG
GCTGGGCTGA TGCTGCGGGC GGTGGGCGAT AGTCCCGCGT CTGCGCATAC ATTGGGGCTG
AAAGTTATCC GCACCCGCTA TCTGGCAGTG ATGTTCGGCG GTGCCTGTTC CGGTCTGGCC
GGGGCGCAAT TGTCGCTGGT CTATACGCCG CAATGGGTGG AAAACATGTC GGCCGGGCGC
GGCTGGATCG CATTGGCTCT GGTGGTGTTT GCCTCCTGGC GACCGGGGCG CGTGCTGGCG
GGCGGCTATC TGTTTGGGGC CGTCACCATC GGCCAGCTGC ATGCACAGGC TTTCGGCATC
GGATTGCCGT CGCAGTTTTT ATCAGCACTT CCTTATGCTG CGACCATTGT CGTTTTGATC
GCGATTTCGC ATAATCGGCG CACAACGTTG ATCAATACAC CCGCTTCTCT GGGAAAGCCC
TTCGTTCCGG ATCGCTGA
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| Protein sequence | MILEAILLTV ITASTPLVIA ALGELVTERA GVLNLGVEGM MVMGAVAAFA TAYSTGSPLL
GVVAGIVAGA GFSLLFGFLT LTLVTNQVAT GLALTILGLG VSGQLGESFV GKPGVKLQAI
EFPVLSDIPV LGPLLFRQDL IFYLAIVLVI GVHWFLFKSR AGLMLRAVGD SPASAHTLGL
KVIRTRYLAV MFGGACSGLA GAQLSLVYTP QWVENMSAGR GWIALALVVF ASWRPGRVLA
GGYLFGAVTI GQLHAQAFGI GLPSQFLSAL PYAATIVVLI AISHNRRTTL INTPASLGKP
FVPDR
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