Gene Avi_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2162 
SymbolccdA 
ID7387179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1776379 
End bp1777125 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content60% 
IMG OID643651359 
Productcytochrome c-type biogenesis protein 
Protein accessionYP_002549553 
Protein GI222148596 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.20604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGATTG CTGAAATTCC ATTTCTGACA GCGCTTGTGG CCGGGACCCT GTCCTTTCTC 
TCGCCCTGTG TTTTGCCGCT GGTGCCGCCT TACCTCTGCT ATATGGCGGG CGTCAGCGTC
GAGCAGTTTC GCGGTGAAGC GGTAGCGGTT GACCGGCGGG CGCGCTCGGC GGTGATTTTT
TCGGCCCTGT GTTTCACCCT GGGCTTTGCA ACGGTCTTCG TGGCGCTCGG GGCGGGCGCG
TCCTCCATCG GTATGATGTT GCGTCAGCAT CTTGATCTCC TGTCGAAGAT TGGCGGCTTG
ATCATCATCG TTATGGGGCT GAATTTTCTA GGCCTGTTTC GCATCGGGCT TTTGGCGCGC
GAAATGCGCT TTGCAGGTGG CGGCAAGCCC GCGACCCTGA CAGGGGCCTA TGTGATGGGG
CTAGCCTTTG CCTTTGGCTG GACGCCCTGC ATCGGCCCTG TGCTGGGTGC TATTCTCGCG
GTCGCCGCAG CCCGTGACAC GGTCGGACAG GGGGCAGTGT TGCTGGCGGT CTATTCGCTG
GGGCTTGCCA TTCCGTTCTG GATCGCCGCT GGCTTTTCAG GGGCTTTCAT GCGGTTTCTC
ACCCGGTTTC GCCGCCATCT CGGTCTGGTG GAAAAGCTCA TGGGGCTGCT TCTGGTCGTA
ACCGGGCTTG CCTTCATCTT TGGTTTTGTG TCCGATCTGG CGATCTGGTT CCAGCAAAGC
TTTCCGATCC TGTCACGGAT CGGATAA
 
Protein sequence
MTIAEIPFLT ALVAGTLSFL SPCVLPLVPP YLCYMAGVSV EQFRGEAVAV DRRARSAVIF 
SALCFTLGFA TVFVALGAGA SSIGMMLRQH LDLLSKIGGL IIIVMGLNFL GLFRIGLLAR
EMRFAGGGKP ATLTGAYVMG LAFAFGWTPC IGPVLGAILA VAAARDTVGQ GAVLLAVYSL
GLAIPFWIAA GFSGAFMRFL TRFRRHLGLV EKLMGLLLVV TGLAFIFGFV SDLAIWFQQS
FPILSRIG