| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2153 |
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| Symbol | rlpA |
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| ID | 7387869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1765636 |
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| End bp | 1766784 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643651349 |
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| Product | rare lipoprotein A |
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| Protein accession | YP_002549544 |
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| Protein GI | 222148587 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0797] Lipoproteins |
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| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTGC AGCGGCGTTC AGTTTCCGGA TGTTTGCGGA TGGCATGGGT TGTTCTGGCG
GGCGTGGCGG TGACGTCCTG CGGCGCCAAC CATGATGTGA GCAAGGTCAG CACGACCAAG
AAACGCAGCA AGGAATATTT TGCCGAATCC GCCTATGGCG TGAAGGCCAG CCCCCGTGTG
GTGGAAAACG GCCCTGTGCC GAAAGGCGGC GGTCGCCGTC TGGTCGGGAA CCCCTACGTG
GTGGCAGGCA AGGTCTATAA GCCACGCGAG AACCCCAATT ACGAAGCATC CGGGCTTGCC
TCATGGTATG GCTCGGCTTT CCATGGGCGC TACACGGCCA ATGGCGAAGT CTATGACCAA
TACGGCATCT CTGCTGCCCA TCCGACCATG CCGCTCCCCA GCTACGCCCG TGTTACCAAT
CTCGATACCG GCAGTTCGGT CATTGTTCGC GTCAACGATC GTGGCCCGTT CCACGCCAAT
CGCCTGATCG ATCTCTCCGA CAAGGCAGCC GAACTTCTTG ACGTCAAGGG CCACGGCACA
GCTAATGTGA AGGTCAAATA TGTCGGCCCA GCCGATATGA CCGGCCACGA CATGCCCTAT
CTGATGGCAT CTTATGTCCG CAAGGGTCAG CGTGTTCCCG GCGTCGATCC CTTCGGTGGT
GGCCAGATCG CCAGTGGTGT GATGGTGGCG TCGAATGCGC CGCAGCAGAA TTTCTTCGGC
CGTTTCGCAG GCCCGGCCAG CGCGTCTGCA CCGCAGCCGA AAACGGCAAA ACCGGTTATT
GCGCCGGCGT CAGCCTCGGC TTACGGCAGC AACTCCTATC CGGTTTCCGC CAGTGCGAAT
GCGCCGCGCC CGGTTCAGCG TCAGCCGGTC GCCGTATCGC GGCCAGAACC GACCCGCATT
GAGCCGACCC GCGAATGGCA GGCTCCGGCC ATTGCCTCCG CTGAGCCGAT GCCGCAGCCG
CGCAATGCTG CCAGCACCGG CGTTGCTCGC CGGGAGATGG CGCCTGTGGT CGCACCGCAG
CCGGTTCGGG CTACCGCAAC CCGTCAAAAG CCCGTGGCTG CACCGTCCAA TGGCGGCCTG
CCGCCCGGCT GGCATGTTGG CCCGGCTCCG GTAACAGCCA ATGCCTATTC CAATCCCAAT
GAAGGTTGA
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| Protein sequence | MVLQRRSVSG CLRMAWVVLA GVAVTSCGAN HDVSKVSTTK KRSKEYFAES AYGVKASPRV
VENGPVPKGG GRRLVGNPYV VAGKVYKPRE NPNYEASGLA SWYGSAFHGR YTANGEVYDQ
YGISAAHPTM PLPSYARVTN LDTGSSVIVR VNDRGPFHAN RLIDLSDKAA ELLDVKGHGT
ANVKVKYVGP ADMTGHDMPY LMASYVRKGQ RVPGVDPFGG GQIASGVMVA SNAPQQNFFG
RFAGPASASA PQPKTAKPVI APASASAYGS NSYPVSASAN APRPVQRQPV AVSRPEPTRI
EPTREWQAPA IASAEPMPQP RNAASTGVAR REMAPVVAPQ PVRATATRQK PVAAPSNGGL
PPGWHVGPAP VTANAYSNPN EG
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