Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2119 |
Symbol | |
ID | 7387842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1737898 |
End bp | 1738164 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643651322 |
Product | hypothetical protein |
Protein accession | YP_002549517 |
Protein GI | 222148560 |
COG category | [S] Function unknown |
COG ID | [COG2841] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0915376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCAACA CTCCACATGA ACTGGCAGAG GAATTTCCGG AATTTGTGAC CCTGATGCGG CATTTGAAGG AAACGGACGG TCATTTCGTC CGGCTGTTCG ATGCCTATCA CGAGATCAAC CGGCAGGTTC ACCGCGCTGA AACCGATATA GAGCCGCTCG ACGACTTCCA TATGGAAGAC CTCAGGAAGA AGCGGATGCG GCTCAAGGAC GAAATCTACG GGATGCTGGT TCGTCACGAA CCGGAGGCCG AGACACCGGC ATTATAA
|
Protein sequence | MSNTPHELAE EFPEFVTLMR HLKETDGHFV RLFDAYHEIN RQVHRAETDI EPLDDFHMED LRKKRMRLKD EIYGMLVRHE PEAETPAL
|
| |