| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2096 |
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| Symbol | ccoP |
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| ID | 7386897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1716952 |
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| End bp | 1717815 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651306 |
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| Product | cytochrome c oxidase cbb3-type subunit III |
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| Protein accession | YP_002549501 |
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| Protein GI | 222148544 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.04303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACA AACACATTGA CGAAATCAGC GGTGTCGAAA CTACGGGCCA TGAATGGGAC
GGCATCCGCG AGCTGAACAA TCCGATGCCG CGTTGGTGGG TCTATACCTT CTACGCTACC
ATCGTCTGGG CCATCGGCTA TACGGTGGTT TATCCGGCCT GGCCGATGCT CTCTACCAAT
ACCAAGGGCC TGTTCGGTTA TACCAACCGT GCCGCTGTCA CCGCCGAGCT TGCCGACGCC
AAGGCAGCGC AATCGGTGTT TACCGACAAG ATCGCCGCCC TGCCGATCAA GGATATCCTG
GCCGACAAGG ACCTGACCGA ATTCGCCACC GCTGGTGGTG CTGCGGCCTT CAAGGTCAAT
TGTACCCCCT GTCACGGTTC CGGTGCGGCC GGTGGCCCCG GCTATCCGAA CCTGAACGAC
GATGACTGGC TGTGGGGCGG TAGTGTGGAT GCCATCTACA CGACGCTGCA ACACGGTATT
CGCTACACGA GTGATCCGGA AACCCGGGCG TCGGAAATGC CGGCCTTCGC CGACATCCTG
AAGCCCGAGG AAATCCGCCA GGTCTCCGCC TATGTCGTCA GCCTGACGGG CAAGCCGTCC
AACGACGCAT TGGTTGCGCC TGGAAAGCAG GTCTTCATGG ACAATTGTGT TGCCTGCCAC
GGTGAAAAGG CCGAGGGCAA CCGCGATCTC GGTGCGCCCA ATCTCGGCGA CGCCATTTGG
CTGAAGGTCA AAGGCGAGCA GGAGATCATC CAGCAGGTGG CTCATCCCAA GCATGGCGTC
ATGCCGGGAT GGTCAGCACG TCTAGGCGAT ACGACAGTCA AGGAACTGAC CGTCTACGTC
CACTCACTCG GCGGCGGGGA GTGA
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| Protein sequence | MSDKHIDEIS GVETTGHEWD GIRELNNPMP RWWVYTFYAT IVWAIGYTVV YPAWPMLSTN
TKGLFGYTNR AAVTAELADA KAAQSVFTDK IAALPIKDIL ADKDLTEFAT AGGAAAFKVN
CTPCHGSGAA GGPGYPNLND DDWLWGGSVD AIYTTLQHGI RYTSDPETRA SEMPAFADIL
KPEEIRQVSA YVVSLTGKPS NDALVAPGKQ VFMDNCVACH GEKAEGNRDL GAPNLGDAIW
LKVKGEQEII QQVAHPKHGV MPGWSARLGD TTVKELTVYV HSLGGGE
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