| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2058 |
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| Symbol | pip |
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| ID | 7386872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1688809 |
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| End bp | 1689783 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651281 |
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| Product | proline iminopeptidase |
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| Protein accession | YP_002549476 |
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| Protein GI | 222148519 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.689253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGAC CAGATCTTCA TCCGCCCTTG CCACCTTACC GAACCGGCCA TCTGCCGGTC
ACCGACGGCC ACCAGATCTA TTTCGAATGC AGCGGCAACC GTAAGGGCAT CCCGGCCCTT
ATTCTGCATG GCGGCCCAGG CTCCGGGCTC TCTGAAACAA CACGCCGGTT CTTCGACCCC
GCGCACTATC ACATCATCCA GTTCGACCAG CGCCACTGCG GCCGCAGTCT TCCCTTTGCT
GGCGATCCGG TGGTCGATCT CAGCACCAAC ACACTGCCGC ATCTGCTTGA GGATATCGAA
GCCTTACGCC TCCATCTCGG CATTGAGCGC TGGTTGGTGA TGGGCGGATC ATGGGGATCA
ACGCTAGCGC TCGCCTATGC CCAAGCGCAT CGGACACGGG TTCTCGGCCT GCTGCTGACC
ATGGTCGTCA CGACAAGTGC TGCCGAAATC GAATGGATCA CGCGCGGCGT CGGACAGTTT
TTTCCGGCAG AACATGCACG CTTTCTCGAC CATCTTCCAA GGGATCAGCA AGACGGCGAT
CTCACTACCG CCTATCACCG GCTGCTGATC AATCCTGACA AAGAGATTCA TGAAAAGGCC
GCAAGTGCCT GGTGTGCATG GGAATCTGCC ACTCTCTCCA TAAAGCCGGG CTATGTCCCA
CATGTCAGGT GGTCGGACGC CCGATTTCGG CTGTGCTTTT CCCGGCTCGT CACCCATTAC
TGGTCGCATC GTGCCTGGCT AGCCGATGGC GAAATCCTTC GGCGTATCAA ACTATTAGAG
GGTCTTCCTG CGATATTGAT TCATGGCCGA CTCGATTTCG GCAGCCCACT CAAGACCGCC
TATGACCTGC ACCTTGCATG GGCTGGCAGT CGGTTGATTA TCGTCGAGGA TGGCGAACAC
AATATCAGTG CGCCAGGTAT GGCGGCCAAC GTCATCAGGT CGCTTCAACA GCTTGCCCAC
GAATTGAAAC CTTGA
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| Protein sequence | MTGPDLHPPL PPYRTGHLPV TDGHQIYFEC SGNRKGIPAL ILHGGPGSGL SETTRRFFDP
AHYHIIQFDQ RHCGRSLPFA GDPVVDLSTN TLPHLLEDIE ALRLHLGIER WLVMGGSWGS
TLALAYAQAH RTRVLGLLLT MVVTTSAAEI EWITRGVGQF FPAEHARFLD HLPRDQQDGD
LTTAYHRLLI NPDKEIHEKA ASAWCAWESA TLSIKPGYVP HVRWSDARFR LCFSRLVTHY
WSHRAWLADG EILRRIKLLE GLPAILIHGR LDFGSPLKTA YDLHLAWAGS RLIIVEDGEH
NISAPGMAAN VIRSLQQLAH ELKP
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