Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2051 |
Symbol | |
ID | 7386867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1684429 |
End bp | 1685964 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643651276 |
Product | two component sensor kinase |
Protein accession | YP_002549471 |
Protein GI | 222148514 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAACG GCGTTTCAAA CTCTACTGAC AAGAATATTG TCGACCTATC GCATAGCCAC CGCAACAAGG CGACGGCAAA AGCCTTACGC GTGACCAGAG AACGCCTGCA TTCCACCCAT GGCGGCACAC CGGCTTTCGA AAAAGACCTG CTGTCTATGC ATACCCAGGC CAGCCTGCAG GGCGCGGCCA TCACACCCTT CGTCACGATC CTGACCGCCG GCCTCACGGC CTACCTGTCG GGAAGCCCGA TCTATATCCT CTGGGCGCTG CTGACGCTGA GCATTCACGC CCTGAACATT CTGCTCATCC GCAAGGCTGC CAAGCGCATT CCGGTCACCC ATCGCCAGGA ACATTGGCGC CATGTGCTGT TGGCCGGGCA TCTGGCCATG GGATGCTGCT GGGCCGCCTT TACCTTCCAG ACCTGCGATG CGTGCGGCCC GACAAGCGAC CTGCTGCTTA AAGGTTCCGT GCTGCTGGTG GTGCTCTGCA CCACGGCCAT GACCAATATT TTGCTGCGTC AGGCCGTACT CTATGCGTTT ACCCCACCGA TCATCGCGCT ATCCGCCCAG GCGTTTTTCT CGCAGCGTGT CGACGACGCA ACGCTGGCTT TGGCCTTTAC CGTTTCCGTG CTGTTCTTCA TCTATATCAC CGGCAGGCTC TATGTCTCGA ACCTCAAGCT GATCTCCTTC CAGAGCGAGA AGGACGACCT GATCGCCGAG CTGGAAGTGG CCAAATCCAT GTCGGATGAG GCCCGCCGCC GGGCGGAAGA AGCAAATATG GCAAAATCGC GTTTTCTCGC ATCGATGTCG CATGAGTTGC GCACACCATT GAATGCCATT CTCGGCTTTT CCGAGGTCAT GGCCCAGGAA GTGCTGGGGC CGCTCAATAA TCCGCTCTAC CGGGAATATT CCGGCGATAT TCACAGGTCC GGCCAGCACC TGCTTAATCT GATCAACGAA ATCCTCGATC TGTCCCGAAT CGAGGCTGGA AAATACGATC TTTCGGAAGA ATCGATCTCG TTGCTTGAAG TCGCCGAGGA CTGCGTCGGC ATGGTGCAAT TGCGCGCCAA GGCCAAGGAC ATCAAGATAT CCCAGCAATA TGAGATCAAC CTGCCCGCCC TTTGGGCCGA TGAAAAAGCC CTTCGGCAAG TGGTGCTGAA CCTCTTGTCA AATGCGGTGA AATTCACGCC GCCGGGCGGA GAAATTCTCG TCAAGGTCGG CTGGACCGTC GGCGGCGGGC AATATGTCTC CATCAAAGAC AATGGTCCCG GCATCGCCGA AGAGGAAATC CCCGTGGTGC TCTCGGCCTT CGGCCAAGGC TCCATCGCCA TCAAGAGCGC CGAACAGGGG ACGGGCCTCG GCCTTCCCAT CGTCCAGGCA ATCCTTGCCA AACATGGCGG CGAATTCAAG CTGAAGTCAA AACTGCGCGA AGGGACGGAA GTGATTGCCA TCCTGCCCGC CAAGCGCGTC CTGCAAACGA TTCCCGCCGT ACAGGGCACC CAGGCCGTGG AACCGAAGCG GCGTTATTTC GCCTGA
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Protein sequence | MGNGVSNSTD KNIVDLSHSH RNKATAKALR VTRERLHSTH GGTPAFEKDL LSMHTQASLQ GAAITPFVTI LTAGLTAYLS GSPIYILWAL LTLSIHALNI LLIRKAAKRI PVTHRQEHWR HVLLAGHLAM GCCWAAFTFQ TCDACGPTSD LLLKGSVLLV VLCTTAMTNI LLRQAVLYAF TPPIIALSAQ AFFSQRVDDA TLALAFTVSV LFFIYITGRL YVSNLKLISF QSEKDDLIAE LEVAKSMSDE ARRRAEEANM AKSRFLASMS HELRTPLNAI LGFSEVMAQE VLGPLNNPLY REYSGDIHRS GQHLLNLINE ILDLSRIEAG KYDLSEESIS LLEVAEDCVG MVQLRAKAKD IKISQQYEIN LPALWADEKA LRQVVLNLLS NAVKFTPPGG EILVKVGWTV GGGQYVSIKD NGPGIAEEEI PVVLSAFGQG SIAIKSAEQG TGLGLPIVQA ILAKHGGEFK LKSKLREGTE VIAILPAKRV LQTIPAVQGT QAVEPKRRYF A
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