| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1934 |
|---|
| Symbol | |
|---|
| ID | 7387235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1601928 |
|---|
| End bp | 1602749 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643651197 |
|---|
| Product | inositol monophosphatase family protein |
|---|
| Protein accession | YP_002549394 |
|---|
| Protein GI | 222148437 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.780742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATA TCGACATTGC AGCCCTTGCC AATCTTCTGC AGGAAGCGGC AGTCACGGAA
ATCCTGCCGC GTTTTCGCAA TCTGGGCGAG GGCGATGTGC GGATGAAAAC CGAGGCCATC
GATCTGGTCA CCGAGGCCGA TGAAGCAGCG GAGCGGTTGA TCCACAGCTG TATCAAGGAG
TTGATGCCGG ATGCTGTCTT CATTGGTGAG GAAGCGGTTG CCGCTGATCC GGCCCTGCTG
AACAAGCTGG CGGATGCGGA GTTGGCCGTG GTAGTCGATC CCATCGACGG TACCTTTAAT
TTTGCGGCCG GCCTGCCGCT GTTCGGGGTT ATGCTCAGCG TCGTACGTCA GGGCGAAACC
GTTGCTGGCC TGATTTACGA CCCGATGGGC AACGACTGGG CAATCGTTGA AAAAGGCAGT
GGCGCCTGGC TCTGCAAACC CGATGGCAAC CAGGAAAAGA TGGAGGTGCG CCCGGCACCC
GATCTTGCCC AGATGATCGG CATTGCCAAT GTCGGCTTCT TCGAACTGGA GGCGCGCCGC
AAGCTGCTGG TCAATCTGGC TGAGGTGCGG CTGTTCACCA GCTATCGCTG TGCCGCCCAC
GAATACCGCA TTCTCTGCCA GGGCCATATG CATTTTGCCA TGTATAACAA GCTAATGCCC
TGGGATCACC TGGCCGGCAC GCTGATGGCC CAGGAGGCAG GCGCCTATGC CGCGAGGTTC
GATGGCTCTG CCTACCTGCC GCACCACACC AACGGCGGCC TGCTGATTGC CCCAGACAAA
GAAAGCTGGA CCGAATTGCG GGAAAAGATT TTCAACGTTT AA
|
|---|
| Protein sequence | MADIDIAALA NLLQEAAVTE ILPRFRNLGE GDVRMKTEAI DLVTEADEAA ERLIHSCIKE
LMPDAVFIGE EAVAADPALL NKLADAELAV VVDPIDGTFN FAAGLPLFGV MLSVVRQGET
VAGLIYDPMG NDWAIVEKGS GAWLCKPDGN QEKMEVRPAP DLAQMIGIAN VGFFELEARR
KLLVNLAEVR LFTSYRCAAH EYRILCQGHM HFAMYNKLMP WDHLAGTLMA QEAGAYAARF
DGSAYLPHHT NGGLLIAPDK ESWTELREKI FNV
|
|---|
| |