| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1850 |
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| Symbol | rplN |
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| ID | 7386812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1537810 |
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| End bp | 1538178 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651136 |
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| Product | 50S ribosomal protein L14 |
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| Protein accession | YP_002549333 |
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| Protein GI | 222148376 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0093] Ribosomal protein L14 |
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| TIGRFAM ID | [TIGR01067] ribosomal protein L14, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.114328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCAGA TGCAGACTAA CCTCGACGTT GCCGATAATT CCGGCGCGCG TCGTGTCATG
TGCATCAAAG TGCTGGGCGG TTCTAAGCGC AAATACGCTT CGGTCGGCGA CATTATCGTC
GTTTCGATCA AGGAAGCTAT TCCGCGCGGC CGCGTGAAAA AGGGTGATGT GATGAAGGCC
GTGGTGGTTC GCACCGCCAA GGACATCCGT CGCGCCGACG GCAGCGTCAT CCGCTTCGAT
AACAACGCAG CCGTTCTTAT CGACAACAAG AAAGAGCCAA TCGGCAGCCG TATCTTCGGA
CCGGTTCCGC GCGAACTTCG CGCTAAGAAC CACATGAAGA TCATCTCGCT GGCTCCTGAA
GTTCTTTAA
|
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| Protein sequence | MIQMQTNLDV ADNSGARRVM CIKVLGGSKR KYASVGDIIV VSIKEAIPRG RVKKGDVMKA
VVVRTAKDIR RADGSVIRFD NNAAVLIDNK KEPIGSRIFG PVPRELRAKN HMKIISLAPE
VL
|
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