Gene Avi_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1849 
SymbolrpsQ 
ID7386811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1537340 
End bp1537576 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content54% 
IMG OID643651135 
Product30S ribosomal protein S17 
Protein accessionYP_002549332 
Protein GI222148375 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0186] Ribosomal protein S17 
TIGRFAM ID[TIGR03635] 30S ribosomal protein S17 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0814594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAC GCATTCTGCA GGGCGTCGTG GTCAGCGACA AGAACGAGAA GACCGTTGTA 
GTCCGGGTTG AGCGTCGATT CGCTCACCCG CTGCTTCAGA AGACCGTTCG TCGCTCGAAG
AAATACAAGG CTCACGACGA GAGCAATCAG TATAAGATTG GTGACGTGGT TTCCATTGAG
GAATGCGCAC CGATTTCCAA GGATAAGTGC TGGACGGTCG TTTCCGCCCA GGCTTAA
 
Protein sequence
MPKRILQGVV VSDKNEKTVV VRVERRFAHP LLQKTVRRSK KYKAHDESNQ YKIGDVVSIE 
ECAPISKDKC WTVVSAQA