Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1849 |
Symbol | rpsQ |
ID | 7386811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1537340 |
End bp | 1537576 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643651135 |
Product | 30S ribosomal protein S17 |
Protein accession | YP_002549332 |
Protein GI | 222148375 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0186] Ribosomal protein S17 |
TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0814594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAAAC GCATTCTGCA GGGCGTCGTG GTCAGCGACA AGAACGAGAA GACCGTTGTA GTCCGGGTTG AGCGTCGATT CGCTCACCCG CTGCTTCAGA AGACCGTTCG TCGCTCGAAG AAATACAAGG CTCACGACGA GAGCAATCAG TATAAGATTG GTGACGTGGT TTCCATTGAG GAATGCGCAC CGATTTCCAA GGATAAGTGC TGGACGGTCG TTTCCGCCCA GGCTTAA
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Protein sequence | MPKRILQGVV VSDKNEKTVV VRVERRFAHP LLQKTVRRSK KYKAHDESNQ YKIGDVVSIE ECAPISKDKC WTVVSAQA
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