| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1843 |
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| Symbol | rplB |
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| ID | 7386805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1534427 |
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| End bp | 1535263 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651129 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_002549326 |
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| Protein GI | 222148369 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0328595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTGA AAAATTTCAA TCCGACAACC CCGAGCCAGC GTCAGCTGGT CATCGTTGAC
CGGTCGGGCC TTTACAAGGG CAAGCCTGTC AAGTCGCTGA CCGAGGGTCT GTCTTCGAAG
GGCGGTCGCA ACAATCTCGG TCGCATCACC GTTCGCTTTC AGGGCGGTGG TCACAAGCGC
ACCTATCGTC TGGTGGACTT CAAGCGTCGT AAGTTCGACG TAGAGGGCAC TGTCGAGCGT
CTGGAATACG ACCCCAACCG TACGGCGTTT ATTGCGCTGA TCACCTATGC CGATGGCGAG
CAGGCCTATA TCCTGGCTCC GCAGCGTTTG GCAGCCGGTG ACAAGGTTAT CGCATCGGAC
AAGGCTGTCG ACGTCAAGCC CGGCAACGCT ATGCCGCTGC AATACGTCCC GGTCGGCTCC
ATCGTTCACA ATGTCGAGCT GAAGCCCGGC AAGGGCGGTC AGGTTGCCCG TTCCGCTGGT
GCCTACGTTC AGCTGGTCGG TCGCGATGCC GGCATGGCTA TCCTGCGCCT TAGCTCGGGT
GAACAGCGCT TGGTGCACGG CACTTGCCTT GCAACGGTCG GCGCCGTGTC GAACTCCGAT
CACGGCAACA TCAATGACGG CAAGGCTGGT CGTTCGCGTT GGCGCGGTAA GCGCCCGCAC
GTTCGCGGTG TCGTCATGAA CCCAGTCGAC CACCCGCACG GCGGTGGTGA AGGCCGCACC
TCCGGTGGCC GTCATCCGGT TTCCCCTTGG GGTAAGCCGA CCAAGGGCAA GCGTACGCGG
TCGAACAAGT CCACGGACAA GTTCATCATG CGTTCCCGCC ACCAGAAGAA GAAGTAA
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| Protein sequence | MALKNFNPTT PSQRQLVIVD RSGLYKGKPV KSLTEGLSSK GGRNNLGRIT VRFQGGGHKR
TYRLVDFKRR KFDVEGTVER LEYDPNRTAF IALITYADGE QAYILAPQRL AAGDKVIASD
KAVDVKPGNA MPLQYVPVGS IVHNVELKPG KGGQVARSAG AYVQLVGRDA GMAILRLSSG
EQRLVHGTCL ATVGAVSNSD HGNINDGKAG RSRWRGKRPH VRGVVMNPVD HPHGGGEGRT
SGGRHPVSPW GKPTKGKRTR SNKSTDKFIM RSRHQKKK
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