| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1842 |
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| Symbol | rplW |
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| ID | 7386804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1534122 |
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| End bp | 1534415 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651128 |
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| Product | 50S ribosomal protein L23 |
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| Protein accession | YP_002549325 |
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| Protein GI | 222148368 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0089] Ribosomal protein L23 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00948056 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGATC TTCGCCACTA CGACGTGATC GTATCTCCAT CGATCACTGA AAAGTCCACG
CTGGTTTCCG ATTTTAACCA GGTGGTCTTC AACGTCGCCC GGACTGCTTC CAAGCCTGAA
ATCAAGGCTG CCGTCGAAGC ACTGTTCGGT GTCAAGGTCA CAGCTGTGAA TACGCTGCTC
CGCAAGGGCA AGACTAAGCG TTTCCGCGGC TTCGCCGGTA AGCAGAAGGA TGTGAAGAAG
GCGATCGTTA CGCTCGCCGA GGGTCAGTCC ATCGACGTCT CCACCGGTCT CTGA
|
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| Protein sequence | MTDLRHYDVI VSPSITEKST LVSDFNQVVF NVARTASKPE IKAAVEALFG VKVTAVNTLL
RKGKTKRFRG FAGKQKDVKK AIVTLAEGQS IDVSTGL
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