Gene Avi_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1834 
SymbolrpsG 
ID7386798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp1528198 
End bp1528668 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content58% 
IMG OID643651122 
Product30S ribosomal protein S7 
Protein accessionYP_002549319 
Protein GI222148362 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0342202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTC GCCATAAAGC AGAAAAGCGT GAGATCAACC CGGACCCAAA GTTCGGTGAT 
CTGGTCGTCA CCAAGTTCAT GAACGCCATC ATGTTGCACG GCAAGAAGTC CGTTGCTGAA 
AGCATCGTCT ACGGTGCCTT CGATGTCGTT GAAGCCAAGT CCAAGGCAGA GCCGATCGCA 
ATCTTCCATC AGGCGCTTGA AAATGTTGCC CCGCATGTTG AAGTTCGCTC GCGCCGCGTT 
GGTGGTGCAA CATACCAGGT CCCCGTCGAC GTCCGTCCGG AGCGCCGTCA GGCGCTCGCC 
ATTCGCTGGC TGATCATCGC CGCCCGCAAG CGCAACGAGA CCACCATGGT CGATCGTTTG 
TCAGGCGAAT TGCTTGATGC GTCCAACAAT CGCGGCAGCG CTGTCAAGAA GCGTGAAGAC 
ACGCACAAGA TGGCCGACGC CAACCGCGCC TTCTCGCATT ACCGCTGGTA A
 
Protein sequence
MSRRHKAEKR EINPDPKFGD LVVTKFMNAI MLHGKKSVAE SIVYGAFDVV EAKSKAEPIA 
IFHQALENVA PHVEVRSRRV GGATYQVPVD VRPERRQALA IRWLIIAARK RNETTMVDRL 
SGELLDASNN RGSAVKKRED THKMADANRA FSHYRW