Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1797 |
Symbol | mrcA |
ID | 7386776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1501128 |
End bp | 1503584 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643651096 |
Product | penicillin-binding protein 1a |
Protein accession | YP_002549297 |
Protein GI | 222148340 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGAC TGATTGGATA TCTCTTCGGA TTGGCTTCCG TTGCCGCGCT TGCCGCGGCA GCCGCTGCTG CCATCTATCT GACGACCATT ACCAAGGATC TACCTGATTA CGAGGTATTG AGCCGGTATG CGCCGCCGGT GATGACCCGC GTCCATGCCG GTAACGGCGC GCTGATTGCC GAATATGCCC ATGAACGGCG GCTGTTCATG CCGATCCAGG CCATTCCAGA TCGTGTGAAG GCGGCTTTCT TGTCGGCGGA AGACAAGAAT TTCTACACCC ATCCCGGTGT TGATATCTGG GGCCTTGGCC GCGCCATCCT GGTGAACTTG CAGAATTTCG GCTCCGGTCG CCGTCCCGTC GGCGCTTCGA CCATCACCCA GCAGGTCGCC AAGAACTTTC TTCTGTCGTC CGACCAGACC ATGGACCGCA AGATCAAGGA AGCCATTCTC TCCTTCCGCA TCGAGCAGGC CTATTCCAAG GACAAGATCC TTGAGCTTTA TCTGAACGAG ATTTTCTTTG GCCTGAATTC CTATGGTATC GCTGCGGCGG CACTCACCTA TTTCGACAAG CCGGTCACCG AACTGACCAT TGCCGAAACC GCTTATCTTG CTTCTCTGCC TAAAGGCCCG GCCAACTACC ATCCCTACCG TCATACCCAG GCTGCTATCG AGCGCCGCAA TTGGGTTATC GACCGGCTGG TGGAGAACGG CTTCGTCAGC CAGGCCGATG GCGACACTGC TAAAAAGGAA GACCTGGGCG TCAACCTGCG GCGCGGTGGT GGCAATGTCT TTGCCTCGGA TTATTTCTCC GAAGAAGTGC GCCGTCAGAT TATCGATAAA TACGGCACCA AGTCCCTTTA TGAAGGCGGG CTTTCTGTGC GCACCTCGCT CGATCCAGAG CTACAAGTCG CCGCCCGCAA GGCGCTTCAG GATGGTTTGC TGAGCTATGA CGAACGGCGT GGCTATCGCG GTCCGATCAC CCATATAGAC ATGGGGTCCG ACTGGGGCGT GCCGCTGGCC GATGTGGCTA GCCTTGCCGA CGTGCCGGAA TGGGAAGTCG CGGTCGTGCT CTCTACTTCC AAGACCGAGG TGCAGATCGG TCTGAAACCG GATCGTGACG GCGCGGGCAA AGTCGTGCCG GAGCGTCTGA CAGGCACCAT CAAGGCCGAT GCCATGGACT GGGCCTATCG GTCGGGACGT GGCGACCGCA AAACCGCCAA ATCGCCTGAC GGTGTCTTGC AGCCCGGTGA CGTGGTCTAT GCTGAAAAGA TCGGCGCCGA TACCTCCACC AATTATCGCC TTCGGCAGCC GCCGAAAGTC CAGGGCGGTT TCGTTGCCAT GGACCCGCAT ACAGGTCGCG TTTTGGCGCT GGTTGGCGGC TTCTCCTACG CCCAATCGGA ATTCAACCGT GCGACACAGG CCATGCGTCA GCCGGGTTCG TCCTTCAAAC CCTTCGTCTA TGCGGCGGCG CTGGATAGCG GCTATACGCC TGCTTCCGTG GTGCTGGATG CGCCGGTGGA ATTTGTCTCC GGCGGCGAGG TCTGGCGGCC ACAGAACGAT GGCGGCGGCT CCATCGGCCC GGCAACGCTG CGGTTTGCCA TCGAGCATTC ACGCAACCTG ATGACGGTGC GTCTGGCCAA TGACATGGGC ATGAATCTCG TGGCCGAATA TGCCGAGCGC TTCGGCATTT ACGACCATAT GCAGCCCGTG TTGTCGATGT CGCTCGGGGC AGGGGAAACC ACCGTCATGC GCATGGTCTC GGCCTATGCG GTGATCGCCA ATGGCGGCAA GCAGATCAAG CCGACGCTGA TCGACCGGAT CCAGGATCGC TACGGCAAGA CGATCTTCAA GCATGAAGAG CGGATTTGCG AAGGCTGCAA TGCCGACGAA TGGCATAATC AGGATGAGCC TGTTCTGGCC GATAACCGGT TGCAGGTGCT TGATCCGATG ACCTCCTATC AGATCACCTC AATGATGCAG GGTGTTATTC AGCGCGGCAC GGCCTATGGC AAGATCAAGC TGGACCGCGA CGTGGCGGGC AAGACCGGCA CCACCAACGA CGCGAAGGAT ACCTGGTTCG TCGGCTTCAC CCCGAATATC GTCGCCGGTG TTTATATCGG TTACGACAAT CCGACCCCGA TGGGCCGGGG CGCGACGGGG GGCTCGATGT CAGCACCTGT ATTTAATGAA TTCATGCAGA CCGCAGTGAA GGGCACACCG CCCAGCAAGT TCAAGGTGCC TGACGGTATG CAGATGATTG CCGTCAACCG CAAGACCGGC ATGGCGGCGG TCGTGGGCGA TCCAGATACG ATTGTCGAGG CTTTCAAGCC CGGAACCGGC CCGGCCGACA GCCTCTCGGT GATCGGCATG GACAGCAATA TGCAGCCGGA TGAGATCATG AAAAGCTCGC CGCAGGTCAA CCAGGCCGTT CAGTCCGGGA CGCCCGGCCT GTTTTAA
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Protein sequence | MIRLIGYLFG LASVAALAAA AAAAIYLTTI TKDLPDYEVL SRYAPPVMTR VHAGNGALIA EYAHERRLFM PIQAIPDRVK AAFLSAEDKN FYTHPGVDIW GLGRAILVNL QNFGSGRRPV GASTITQQVA KNFLLSSDQT MDRKIKEAIL SFRIEQAYSK DKILELYLNE IFFGLNSYGI AAAALTYFDK PVTELTIAET AYLASLPKGP ANYHPYRHTQ AAIERRNWVI DRLVENGFVS QADGDTAKKE DLGVNLRRGG GNVFASDYFS EEVRRQIIDK YGTKSLYEGG LSVRTSLDPE LQVAARKALQ DGLLSYDERR GYRGPITHID MGSDWGVPLA DVASLADVPE WEVAVVLSTS KTEVQIGLKP DRDGAGKVVP ERLTGTIKAD AMDWAYRSGR GDRKTAKSPD GVLQPGDVVY AEKIGADTST NYRLRQPPKV QGGFVAMDPH TGRVLALVGG FSYAQSEFNR ATQAMRQPGS SFKPFVYAAA LDSGYTPASV VLDAPVEFVS GGEVWRPQND GGGSIGPATL RFAIEHSRNL MTVRLANDMG MNLVAEYAER FGIYDHMQPV LSMSLGAGET TVMRMVSAYA VIANGGKQIK PTLIDRIQDR YGKTIFKHEE RICEGCNADE WHNQDEPVLA DNRLQVLDPM TSYQITSMMQ GVIQRGTAYG KIKLDRDVAG KTGTTNDAKD TWFVGFTPNI VAGVYIGYDN PTPMGRGATG GSMSAPVFNE FMQTAVKGTP PSKFKVPDGM QMIAVNRKTG MAAVVGDPDT IVEAFKPGTG PADSLSVIGM DSNMQPDEIM KSSPQVNQAV QSGTPGLF
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