Gene Avi_1769 details

Gene Information

• Locus tag: Avi_1769
• ID: 7386754
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1479212
• End bp: 1479916
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 643651074
• Product: metal-dependent hydrolase
• Protein accession: YP_002549275
• Protein GI: 222148318
• COG category: [R] General function prediction only
• COG ID: [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCA CCTGGCTCGG CCATTCGGCT TTTCGTCTCG AAACCGCCAA GGCCACCATT 
CTGATCGACC CGTTCCTGAC CCACAATGCC AGCTTTTCCG GGCTGGATAG GAAGGATATG 
ACCAAGGGCG TCACGCATAT TCTGCTGACC CACGGTCATG GCGACCATGT CGGCGATACG 
GTGGCGATTG CCAAGGATAC CGGTGCAACC GTGCTGGCCA ATGCCGATCT CGCCGCCTGG 
CTTGGTGCCA AGGGTGTGTC CAAAATCGAG ATGGGCAATA CAGGCGGCAC GATCGATCTG 
GGCGGCTTTA CTGCGACCTT TACCAATGCG CTGCATTCCT CCGCACAGAT CACCGAGGAT 
GGCGTGTCGC ATGCGCTCGG CAATGCCAAT GGGTTGATGC TGCATTTCCA GGATGAGGCA 
TCCCTGCTGC ATATGGGCGA TACCGATATT TTCTCGGATA TGGCGCTGAT CAACGAATTG 
CATCAGCCCG ATATTGGTAT CGTGCCGATT GGTGACCGTT TCACCATGGG CGGTGCGGTT 
GCAGCACTTG CCTGCCAACG ATTCTTCAAC TTCAAGACCG CTATCCCCGC CCATTACGGC 
ACCTTCCCGA TCATCGACCA GACCCCGGAA AAATTCGTGG GCGGCATGGA AGGCTCGAAA 
ACCGAGGTCA AGGCACCCAA GCCGGGCGAA ACGCTGTCGC TGTGA 

 

Protein sequence

MKLTWLGHSA FRLETAKATI LIDPFLTHNA SFSGLDRKDM TKGVTHILLT HGHGDHVGDT 
VAIAKDTGAT VLANADLAAW LGAKGVSKIE MGNTGGTIDL GGFTATFTNA LHSSAQITED 
GVSHALGNAN GLMLHFQDEA SLLHMGDTDI FSDMALINEL HQPDIGIVPI GDRFTMGGAV 
AALACQRFFN FKTAIPAHYG TFPIIDQTPE KFVGGMEGSK TEVKAPKPGE TLSL