Gene Avi_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1723 
SymbolnuoI 
ID7386719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp1437301 
End bp1437792 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content56% 
IMG OID643651039 
ProductNADH dehydrogenase subunit I 
Protein accessionYP_002549240 
Protein GI222148283 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID[TIGR01971] NADH-quinone oxidoreductase, chain I 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.341479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTG TTTCCCAGGC TGTCCGCTCG CTGTTTCTGA AAGAGTTCGT CAACGCATTT 
TTCCTGTCGA TGCGTTACTT TTTCAAGCAG AAGGCGACTG TGAACTATCC GTTTGAGAAA 
GGCCCTGTCA GCCCGCGCTT TCGCGGCGAG CATGCGTTGC GTCGCTATCC CAATGGCGAG 
GAACGTTGCA TTGCCTGCAA ATTATGCGAG GCGATCTGTC CGGCCCAGGC GATCACCATC 
GAAGCTGGCC CGCGCCGCAA CGATGGCACG CGCCGCACGG TTCGTTACGA TATCGACATG 
GTAAAATGCA TCTATTGCGG CTTCTGCCAG GAAGCCTGCC CGGTCGATGC GATCGTCGAA 
GGTCCGAATT TCGAATTCTC GACGGAATCA CGCGAAGAAC TCTATTTCGA CAAGGCCAAG 
CTTCTGGCCA ATGGAGATCG GTGGGAGCGG GAAATCGCGC GCAATCTTGC GCAGGATGCC 
CCTTACCGCT GA
 
Protein sequence
MASVSQAVRS LFLKEFVNAF FLSMRYFFKQ KATVNYPFEK GPVSPRFRGE HALRRYPNGE 
ERCIACKLCE AICPAQAITI EAGPRRNDGT RRTVRYDIDM VKCIYCGFCQ EACPVDAIVE 
GPNFEFSTES REELYFDKAK LLANGDRWER EIARNLAQDA PYR