| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1681 |
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| Symbol | rpsI |
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| ID | 7386689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1403453 |
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| End bp | 1403920 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651006 |
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| Product | 30S ribosomal protein S9 |
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| Protein accession | YP_002549210 |
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| Protein GI | 222148253 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0103] Ribosomal protein S9 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00362695 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGACC TCTCTTCCCT GAAGGATCTC GGCACTGCGC AGGAAGCTTC GGCTCCCGTT
CACGTCCGTA AGGTCGACGC TCAAGGCCGC GCTTACGCGA CTGGCAAGCG CAAGAACGCA
ATTGCCCGCG TCTGGGTCAA GCCCGGCACT GGCAAGATCA CGGTCAATGG CCGCGATTTC
CCGGTTTACT TCGCCCGTCC GGTTCTGCAG ATGATTCTGC AGCAGCCTGT CGTTGCTGCT
GCTCGCACCG GTCAGTTCGA CGTTATCGCC ACCGTGACCG GTGGTGGTCT GTCCGGCCAG
GCTGGCGCTG TGCGTCACGG CATTTCCAAG GCACTCACCT ACTTCGAACC GGGCCTGCGC
TCGGTTCTGA AGAAGGGTGG CTTCCTGACC CGCGATAGCC GCGTTGTTGA ACGTAAGAAG
TACGGCAAGG CAAAAGCTCG CCGGTCCTTC CAGTTCTCCA AGCGCTAA
|
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| Protein sequence | MADLSSLKDL GTAQEASAPV HVRKVDAQGR AYATGKRKNA IARVWVKPGT GKITVNGRDF
PVYFARPVLQ MILQQPVVAA ARTGQFDVIA TVTGGGLSGQ AGAVRHGISK ALTYFEPGLR
SVLKKGGFLT RDSRVVERKK YGKAKARRSF QFSKR
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