| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1630 |
|---|
| Symbol | fabH |
|---|
| ID | 7387419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1362897 |
|---|
| End bp | 1363868 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643650968 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| Protein accession | YP_002549173 |
|---|
| Protein GI | 222148216 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTT CAGTTGTTCG CGGTGTTGGC TCGGCTTTGC CCAAGCGGCT ATTGAGTAAC
CGCGAAATGG AAACGCTTGT CGACACGTCG GACGACTGGA TCGTTCAACG CACCGGCATC
AAGCAGCGCT ATATTGCCGG CGAGGGGGAG ACCACCGCTT CGCTTGGCGC TGAGGCTGCC
TTGAAGGCGC TTGAGGCAGC TGGCCTCGCG CCCGCCGATA TCGACATGAT CATCTGCGCC
ACATCGACGC CCGACAACAC TTTTCCGTCG GCTGCTGTGA ATATCCAGAA CCGGCTTGGC
ATGACCCATG GGTTTGCCTT TGACGTTCAG GCCGTCTGCA CCGGGTTCGT CTATGCGATG
ACGACGGCGG ATGCTTATAT TCGTGGCGGA CTGGCAAAGC GGGTGCTGGT GATCGGTGCC
GAGACCTTTT CGCGTATTCT CGACTGGCAG GACCGTACCA CCTGTGTGCT GTTCGGCGAC
GGCGCTGGCG CCCTGGTGCT GGAAGCGGTC GAAGGGCAGG GAACGATTGC CGATCGCGGT
GTGCTGACGG CGCATCTGCG CTCGGACGGC TCGCACAAGG ACAAGCTTTA TGTGGATGGC
GGCCCTTCCA CGACAGGCAC AGTCGGCCAT TTGCGCATGG AAGGCCGTGA AGTCTTCAAA
CATGCCGTCG GCATGATCGC CGATGTGATC GAGCAGTCCT TCGCGGCGTC GGGCCTGACA
GCCGAGGATG TTGATTGGCT TGTGCCGCAT CAGGCCAATC GCCGCATTAT CGACGGTGCG
GCGAAAAAAC TGGATATTCC CCTGGAAAAA GTTGTGATCA CCGTCGATCA GCACGGCAAT
ACATCTGCCG CCTCGATTCC GTTGGCGATT TCGGTTGCGG TCGCCGATGG CCGGATCAAG
CAAGGCGACC TGGTGCTGTT GGAAGCCATG GGCGGCGGAT TTACCTGGGG CGCGCTGCTG
CTACGCTGGT AG
|
|---|
| Protein sequence | MIRSVVRGVG SALPKRLLSN REMETLVDTS DDWIVQRTGI KQRYIAGEGE TTASLGAEAA
LKALEAAGLA PADIDMIICA TSTPDNTFPS AAVNIQNRLG MTHGFAFDVQ AVCTGFVYAM
TTADAYIRGG LAKRVLVIGA ETFSRILDWQ DRTTCVLFGD GAGALVLEAV EGQGTIADRG
VLTAHLRSDG SHKDKLYVDG GPSTTGTVGH LRMEGREVFK HAVGMIADVI EQSFAASGLT
AEDVDWLVPH QANRRIIDGA AKKLDIPLEK VVITVDQHGN TSAASIPLAI SVAVADGRIK
QGDLVLLEAM GGGFTWGALL LRW
|
|---|
| |