| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1580 |
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| Symbol | ppk |
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| ID | 7387383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1319582 |
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| End bp | 1321843 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643650932 |
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| Product | polyphosphate kinase |
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| Protein accession | YP_002549137 |
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| Protein GI | 222148180 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0855] Polyphosphate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.126677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGATG CGCCAACCTT TATATGCCGG AAGGCATTGA AAACGAAGGC GGGAACAATG
GAATCGGTAA CGGAATCGGC GGTATCTCAG GAAACGGTTA TCCTGGCGGG AGAAGAGGTC
GCGCGCGAGG AATTGCTCTC CAGCCCGCAT CGCTTCATCA ATCGCGAATT TTCCTGGCTG
CAATTCAATC GGCGAGTGCT TGAGGAAACC CTGAACACCG CCCATCCGTT GCTGGAGCGT
GTGCGCTTCC TGTCGATTTC CGCCGCCAAC CTGGATGAGT TTTTCATGGT GCGCGTCGCC
GGGCTGGAAG GCCAGGTGCG CCAGGGTATT GTTATCAAGA GCCCTGATGG ACGCACGCCG
GTTGAGCAGC TGGAAGATAT CCTCAAGGAA ATCGACAATC TGCAAATGGA ACAGCAGGCG
TCGCTGGCCG TCTTGCAGCA ATATCTCGCC AAGGAAGACA TTCTGATCGT CCGGCCCTCC
GCTCTTTCCG AGGAAGACCG AACCTGGCTT GGCACTGAAT TCGAGCAGTC GATCTTTCCT
GTCCTGACGC CACTGTCCAT CGATCCGGCC CATCCGTTCC CCTTCATTCC CAATCTCGGT
TTTTCCATGG GCCTGCAACT GGAAAGCCTG CACGGCAAGG AGCCGATGAC GGCATTGCTG
CGCCTGCCGA CCGCGCTGGA CCGGTTCATT CGCCTGCCCG ACGACAAGAA CACCATCCGC
TACATCACGC TCGAAGATGT GGTCGGCATG TTCATCCACC GGCTCTATCC CGGTTATGAC
GTCAAGGGTT ACGGCACGTT CCGCATCATC CGCGACAGCG ATATCGAGGT CGAGGAAGAG
GCCGAGGATC TGGTCCGGTT TTTCGAAACT GCTCTGAAAC GACGTCGCCG CGGCAAGGTG
ATCCGCATCG AGACCGATTC GGAAATGCCA GCGGCGCTGC GCCAGTTCGT GGTGCAGGAG
CTGAATGTGC CCGATAACCG CGTTGCGGTT CTGCCGGGCC TGTTGGCGCT GAATACCATA
TCCGAAATCA CCAAGGCACC GCGTGAAGAT TTGCGGTTTG AGCCTTACAA TGCCCGTTTC
CCGGAGCGGG TTCGTGAGCA TATGGGCGAT TGCCTGGCGG CAATCCGCGA GAAGGACATG
GTGGTTCACC ACCCTTACGA AAGCTTCGAT GTCGTGGTGC AGTTCCTGCT GCAGGCCGCC
CGCGATCCCG ACGTGCTGGC CATCAAGCAG ACGCTTTACC GTACTTCCAA CGATAGCCCG
ATTGTCCGCG CCCTGATCGA TGCCGCCGAT GCCGGAAAAT CGGTGACGGC GCTGGTGGAG
TTGAAGGCCC GGTTTGATGA AGAGGCCAAT ATCCGCTGGG CGCGCGACCT GGAGCGGGCT
GGCGTGCAGG TGGTGTTCGG CTTTATCGAG CTGAAGACCC ATGCCAAGAT GTCGATGGTG
GTGCGCCGCG AGGACGGCAA GCTCAGGACC TATTGCCACC TTGGCACCGG TAACTATCAC
CCGATTACCG CGAAGATCTA TACGGACTTG TCGTTCTTCA CCTGCAATCC GAAGATTGCG
CATGACATGG CCAATGTCTT CAACTTCATC ACCGGCTATG GAGAGCCGGA GGAAAACATG
AAGCTGGCGG TGTCTCCCTA CACGATGCGT TCGCGCATTC TGCGCCATAT CGAGGAAGAA
ACCAGCAATG CCAAGGATGG TAAACCGTCC GGCATCTGGA TGAAGATGAA CTCGCTGGTC
GATCCCGAGA TCATCGATGC GCTTTACCGC GCCAGCCGCG CAGGCGTCGA AGTGGATCTG
GTCATTCGCG GCATTTGCTG CCTGCGGCCG CAGGTGGCGG GTCTCTCTGA AAATATCCGA
GTCAAATCGA TCATCGGGCG GTTCCTTGAG CACAGCCGGA TTTTCTGCTT CGGCAACGGC
CATCGTCTGC CCTCCGAAAA GGCGCTGGTC TATATCGGTT CGGCCGATAT GATGCCGCGC
AATCTCGACC GGCGCGTTGA AACCTTGGTG CCTTTGGTCA ACCCAACCGT GCATGAACAG
GTTCTCTCGC AGATCATGCT GGGCAATCTG ATTGACAACC AGCAGAGCTA CGAGATATTG
CCCGATGGAA CGTCGAGGCG CATCGATGTG CGTGCAGGCG AGGAACCTTT TAACGCGCAA
CAGTATTTCA TGACCAATCC CAGCCTGTCC GGGCGGGGAG AAGCTTTGAA ATCGAGCGCG
CCGAAGCTGA TCGCCGGGGT TGTTTCCGGT CGAAAAAGCT AG
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| Protein sequence | MDDAPTFICR KALKTKAGTM ESVTESAVSQ ETVILAGEEV AREELLSSPH RFINREFSWL
QFNRRVLEET LNTAHPLLER VRFLSISAAN LDEFFMVRVA GLEGQVRQGI VIKSPDGRTP
VEQLEDILKE IDNLQMEQQA SLAVLQQYLA KEDILIVRPS ALSEEDRTWL GTEFEQSIFP
VLTPLSIDPA HPFPFIPNLG FSMGLQLESL HGKEPMTALL RLPTALDRFI RLPDDKNTIR
YITLEDVVGM FIHRLYPGYD VKGYGTFRII RDSDIEVEEE AEDLVRFFET ALKRRRRGKV
IRIETDSEMP AALRQFVVQE LNVPDNRVAV LPGLLALNTI SEITKAPRED LRFEPYNARF
PERVREHMGD CLAAIREKDM VVHHPYESFD VVVQFLLQAA RDPDVLAIKQ TLYRTSNDSP
IVRALIDAAD AGKSVTALVE LKARFDEEAN IRWARDLERA GVQVVFGFIE LKTHAKMSMV
VRREDGKLRT YCHLGTGNYH PITAKIYTDL SFFTCNPKIA HDMANVFNFI TGYGEPEENM
KLAVSPYTMR SRILRHIEEE TSNAKDGKPS GIWMKMNSLV DPEIIDALYR ASRAGVEVDL
VIRGICCLRP QVAGLSENIR VKSIIGRFLE HSRIFCFGNG HRLPSEKALV YIGSADMMPR
NLDRRVETLV PLVNPTVHEQ VLSQIMLGNL IDNQQSYEIL PDGTSRRIDV RAGEEPFNAQ
QYFMTNPSLS GRGEALKSSA PKLIAGVVSG RKS
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