Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1549 |
Symbol | |
ID | 7387361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1299127 |
End bp | 1301046 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643650910 |
Product | ABC transporter nucleotide binding/ATPase protein |
Protein accession | YP_002549115 |
Protein GI | 222148158 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCTTCCC GGCCATCATC GGCCAAAACG CCAGCCATGA TTACCATCAA TGACGTCTCC GCCCGTATTG CAGGCCGCCT GCTGATTGAC CACGCCAGCA TTTCGCTGCC CACGGGTACG AAAGCGGGCC TTGTCGGCCG TAATGGTGCG GGAAAATCCA CCCTGTTCAG GGTGATCACC GGCGACCTGG GAGCCGAAAG CGGCTCGGTC TCCATTCCCA AGAATGCCAA GATCGGTCAG GTGGCGCAGG AAGCCCCCGG CACCGAGGAC AGCCTGATCG AGATCGTCCT GGCTGCCGAC AAGGAGCGCA CAGCGCTGAT GGCGGAGGCC GAAACGGCCA CTGACCCGAA CCGGATCGCC GACATCCAGA TGCGGCTGGT GGATATCGAT GCCCATTCGG CGGAAGCGCG CGCCTCCAGC ATTCTTGCCG GTCTCGGATT TAACCAGGAA GCACAGTTGC GCCCAGCCTC GGCCTTTTCA GGTGGCTGGC GGATGCGCGT GGCGCTGGCC TCGGTGCTGT TTGCCGAACC GGATCTGCTG CTGCTGGACG AACCGACCAA CTATCTCGAC CTTGAAGGTA CGCTCTGGCT GGAGGATTAT ATCCGCCGCT ACCCGCACAC CGTCATCATC ATCAGCCATG ACCGCGACCT TCTCAACAAT GCGGTCAATG CCATCGTCCA TCTCGACCAG AAAAAGCTGA CCTTCTATCG CGGCGGCTAT GACCAGTTTG AGCGCCAGAA GGCCGAGAAC GACGAATTGC AGATGAAGTC GAAGGCCAAG AGTGATGCGG CGCGCAAGCA TCTTCAAGCC TTCATCGACC GGTTCAAGGC CAAGGCCTCC AAGGCAAAGC AAGCTCAGAG CCGTGTGAAA GCGCTGGAGC GCATGGGCAC GGTCTCCGCG GTTATTGAAG ATCACGTCCA GCCCATCACC TTCCCAGAGC CGGAAAAGCA GCCAGCGTCG CCGATCATCG CCATCAATGG CGGTTCCGTG GGTTACGAAC CCGGCAAGCC GATCCTGAAA AACCTTAACC TGCGCATCGA TGCGGATGAC CGCATCGCGC TGCTGGGATC GAACGGCAAC GGTAAGTCCA CCTTCGCCAA ATTCATTTCC GGTCGTCTTC CGCCCGAAAG CGGCGATCTG CGGCTGGCGC CGAGCCTGAA GATCGGCTTC TTCGCCCAGC ATCAGTTGGA CGATCTGGTG CCGGAAGACA CGCCAGTGGA ACACGTGCGC CGGTTGATGC CGCAGGCACC GGAAGCCAAA GTGCGCGCCC GCGTCGCCCA GATGGGTCTG GCCACCGAAA AGATGGCGAC CGCCGCCAAG GATTTGTCCG GTGGTGAAAA GGCCCGGTTG CTGATGGGCC TTGCTGCCTT TCACGCCCCC AACCTGCTGA TCCTCGACGA GCCGACCAAC CATCTCGACA TCGACAGCCG CCGTGCGCTG ATCGAAGCGC TGAATGATTA TGACGGTGCG GTTATCCTGA TCTCCCATGA TCGCCACCTG ATCGAGGCAA CGGTGGACCG GCTCTGGCTG GTCAATAACG GCACCGTCAC CACATTCGAA GGGGACATGG AAGAATACCG CGACCTGATT GTCTCCTCAG GTAAAAAAAA AGAAGAAAAA ATTGACGTAA CCGTCGAAGC CGGGAAAAAA GCTGACCAGC GCAAGGCCAA TGCCGAAAAG CGGGCCGCGC TGGCACCACT GAAGAAAAAG ATCAACGAAA TCGAATCATT GACCAAGAAA CTGGAGACAG TGATTCAAGG TCTTGATGCA GAACTTTCAG ATCCGGTTCT CTACGAAAAG CATCCCGCCA AGGCGGCGGA AAAGGTTAAG CAGCGTGGTG AGGCCGCCGC CAAGTTGAGC GCTGCCGAGG AGCAATGGCT GGAGCTTTCA GCCGAATATG AAGAGGCGAT GGCGGGCTAG
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Protein sequence | MPSRPSSAKT PAMITINDVS ARIAGRLLID HASISLPTGT KAGLVGRNGA GKSTLFRVIT GDLGAESGSV SIPKNAKIGQ VAQEAPGTED SLIEIVLAAD KERTALMAEA ETATDPNRIA DIQMRLVDID AHSAEARASS ILAGLGFNQE AQLRPASAFS GGWRMRVALA SVLFAEPDLL LLDEPTNYLD LEGTLWLEDY IRRYPHTVII ISHDRDLLNN AVNAIVHLDQ KKLTFYRGGY DQFERQKAEN DELQMKSKAK SDAARKHLQA FIDRFKAKAS KAKQAQSRVK ALERMGTVSA VIEDHVQPIT FPEPEKQPAS PIIAINGGSV GYEPGKPILK NLNLRIDADD RIALLGSNGN GKSTFAKFIS GRLPPESGDL RLAPSLKIGF FAQHQLDDLV PEDTPVEHVR RLMPQAPEAK VRARVAQMGL ATEKMATAAK DLSGGEKARL LMGLAAFHAP NLLILDEPTN HLDIDSRRAL IEALNDYDGA VILISHDRHL IEATVDRLWL VNNGTVTTFE GDMEEYRDLI VSSGKKKEEK IDVTVEAGKK ADQRKANAEK RAALAPLKKK INEIESLTKK LETVIQGLDA ELSDPVLYEK HPAKAAEKVK QRGEAAAKLS AAEEQWLELS AEYEEAMAG
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