| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1542 |
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| Symbol | |
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| ID | 7387355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1290931 |
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| End bp | 1292019 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643650904 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549109 |
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| Protein GI | 222148152 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTCA ACACGCTCAG CCGCTATTTT CTCAAGCGCT ATGCAATCAC CGTATTCTGG
TTCGTGATTG GCGTCGCAGC GATCATTTTC CTGATCGACT TCAGCGAGGT CAGTGGCCGG
TTCTCCGACA ACGAACAATC CTCGCTGTTT GGCGTCTTCC TGCTGACGCT GATGCGCCTG
CCGCTGCTGC TCCAGCAAAC CGTACCCTTC ATCGCACTGT TTTCCGGGAT GGTGACCCTG
ATCACCCTGA ACAGGCGCTC CGAATTGGTG ATTGCGCGTG CCGCAGGCAT TTCCGTCTGG
CAGTTCATGT TCCCCTTCCT GCTGGGCGCT TTCATGCTCG GCTGCGCCAC ATCCCTGCTG
ATCAATCCGC TTGCCGCTCT CGGACAGAAA CAGGCTGCGA CACTGGAGGC CGAATACAGC
GACCCCGGCA AGGCCAGCAA CAATAAGAAC TCCGTGCCTT GGATGCGCCA GATCACTGGC
AAGGAAGACA CGATCATCGG CGCGACCTCG GTTCTGGAAG ACGGTACGTT GCTGATGCAG
GCGGTGTTTA TCCACTTCGA CGGCCAGGGT CGAATCACCT CCCGTCAGGA TGCACGCACA
GCGAAGTTGC AAGATGGTTA CTGGTTGCTT AAGGATGTCG TAGAGACCAA GCCTGGCGAA
ACACCCAAGC GGGAGACATC GGCACAAGTT AGCACCAATT TGAAACAGGA ATTTGTACAG
GAGCGTCTCG CACAGCCGGA TACTGTTGCT TTTTATGAAC TTTCTCAGAA AATCGCAGTT
GCCAAATCCT ATGGCGTCTC AACGAAGAAT TTGGAAACGC AGTTTCACAC GCTGCTCTCC
ACTCCCTTCC TTTTCGTTGC GATGACTCTG ATTGCTGCAA CTGTTTCTCT CAAATTCAGC
CGGTTCAACC AGTCACGTTC CGTGATTCTG GGTGGAATCA TTTCGGGCTT CGTGCTTTAT
GTGGCGACAG TGCTCGTGAA GGCGTTCGGA AGCAGTGGCG TTGTGCCTCC GTTCGTTGCG
ACCTGGGTTC CTGTCATTGT TGCGACAGCG CTCGGGGCGA CGATCCTGCT TCATCAGGAG
GATGGTTAG
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| Protein sequence | MMLNTLSRYF LKRYAITVFW FVIGVAAIIF LIDFSEVSGR FSDNEQSSLF GVFLLTLMRL
PLLLQQTVPF IALFSGMVTL ITLNRRSELV IARAAGISVW QFMFPFLLGA FMLGCATSLL
INPLAALGQK QAATLEAEYS DPGKASNNKN SVPWMRQITG KEDTIIGATS VLEDGTLLMQ
AVFIHFDGQG RITSRQDART AKLQDGYWLL KDVVETKPGE TPKRETSAQV STNLKQEFVQ
ERLAQPDTVA FYELSQKIAV AKSYGVSTKN LETQFHTLLS TPFLFVAMTL IAATVSLKFS
RFNQSRSVIL GGIISGFVLY VATVLVKAFG SSGVVPPFVA TWVPVIVATA LGATILLHQE
DG
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